Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing dctM gene

Properties
Regulog: UxuR2 - Rhizobiales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Galacturonate utilization
Effector:
Phylum: Proteobacteria/Alpha
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -64
Score: 5.31022
Sequence: AAATTGGTAAGACCATCTT
Locus tag: Atu3252
Name: uxuR2
Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Locus tag: Atu3253
Name: dctP
Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: Atu3254
Name: dctQ
Funciton: TRAP-type C4-dicarboxylate transport system, small permease component
Locus tag: Atu3255
Name: dctM
Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: Atu3256
Name: idnD2
Funciton: zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase
Locus tag: Atu3257
Name: uxuA
Funciton: D-Mannonate dehydratase (EC 4.2.1.8)
uxuR2-dctP-dctQ-dctM-idnD2-uxuA -64 5.3 AAATTGGTAAGACCATCTT Atu3252
Bradyrhizobium japonicum USDA 110
Position: 10
Score: 5.73088
Sequence: CAATTGGTAAGGCCAATTA
Locus tag: bll6835
Name: uxuR2
Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Locus tag: bll6834
Name: dctP
Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: bll6833
Name: dctQ
Funciton: TRAP-type C4-dicarboxylate transport system, small permease component
Locus tag: bll6832
Name: dctM
Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: bll6831
Name: idnD
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: bll6830
Name: uxuA2
Funciton: D-Mannonate dehydratase (EC 4.2.1.8)
uxuR2-dctP-dctQ-dctM-idnD-uxuA2 10 5.7 CAATTGGTAAGGCCAATTA bll6835
Rhizobium etli CFN 42
Position: -61
Score: 5.68835
Sequence: GAATTGGTCAGGCCAGTTG
Locus tag: RHE_PF00067
Name: uxuR2
Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Locus tag: RHE_PF00068
Name: dctP
Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: RHE_PF00069
Name: dctQ
Funciton: TRAP-type C4-dicarboxylate transport system, small permease component
Locus tag: RHE_PF00070
Name: dctM
Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: RHE_PF00071
Name: idnD2
Funciton: zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase
uxuR2-dctP-dctQ-dctM-idnD2 -61 5.7 GAATTGGTCAGGCCAGTTG RHE_PF00067
Rhizobium sp. NGR234
Position: -63
Score: 5.42627
Sequence: GAATTGGTATGACCACTTG
Locus tag: NGR_b19310
Name: uxuR2
Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Locus tag: NGR_b19300
Name: dctP
Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: NGR_b19290
Name: dctQ
Funciton: TRAP-type C4-dicarboxylate transport system, small permease component
Locus tag: NGR_b19280
Name: dctM
Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: NGR_b19270
Name: idnD2
Funciton: zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase
Locus tag: NGR_b19260
Name: uxuA
Funciton: D-Mannonate dehydratase (EC 4.2.1.8)
uxuR2-dctP-dctQ-dctM-idnD2-uxuA -63 5.4 GAATTGGTATGACCACTTG NGR_b19310
Sinorhizobium meliloti 1021
Position: -55
Score: 5.42627
Sequence: GAATTGGTATGACCACTTG
Locus tag: SMb20441
Name: uxuR2
Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Locus tag: SMb20442
Name: dctP
Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: SMb20443
Name: dctQ
Funciton: TRAP-type C4-dicarboxylate transport system, small permease component
Locus tag: SMb20444
Name: dctM
Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: SMb20445
Name: idnD2
Funciton: zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase
Locus tag: SMb20446
Name: uxuA
Funciton: D-Mannonate dehydratase (EC 4.2.1.8)
uxuR2-dctP-dctQ-dctM-idnD2-uxuA -55 5.4 GAATTGGTATGACCACTTG SMb20441