Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pdxU gene

Properties
Regulog: PdxR - Clostridia-3
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Phylum: Firmicutes
Built upon 21 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides pectinophilus ATCC 43243
Position: -60
Score: 9.34414
Sequence: ATCTGGTAT-(15)-AACTGGCAT-(8)-TTGCCACAT
Locus tag: BACPEC_01644
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -60 9.3 ATCTGGTAT-(15)-AACTGGCAT-(8)-TTGCCACAT BACPEC_01644
Blautia hansenii DSM 20583
Position: -97
Score: 10.9124
Sequence: AACTGGACT-(15)-AACTGGCTA-(8)-TAGCCAGTT
Locus tag: BLAHAN_01809
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -97 10.9 AACTGGACT-(15)-AACTGGCTA-(8)-TAGCCAGTT BLAHAN_01809
Bryantella formatexigens DSM 14469
Position: -125
Score: 10.0426
Sequence: AACTGGACT-(15)-AACTGGACA-(8)-TATCCGGAT
Locus tag: BRYFOR_03586
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -125 10 AACTGGACT-(15)-AACTGGACA-(8)-TATCCGGAT BRYFOR_03586
Clostridiales bacterium 1_7_47_FAA
Position: -182
Score: 10.4653
Sequence: AAGTGGACT-(15)-AACTGGATA-(8)-AGTCCACTT
Locus tag: Cbac1_010100020035
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -182 10.5 AAGTGGACT-(15)-AACTGGATA-(8)-AGTCCACTT Cbac1_010100020035
Clostridium bolteae ATCC BAA-613
Position: -104
Score: 10.4081
Sequence: ATCTGGACT-(15)-AACTGGATA-(8)-AGTCCACCT
Locus tag: CLOBOL_05306
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -104 10.4 ATCTGGACT-(15)-AACTGGATA-(8)-AGTCCACCT CLOBOL_05306
Clostridium nexile DSM 1787
Position: -97
Score: 9.37632
Sequence: AACTGGACT-(15)-AACTGGTAT-(8)-ATACCAGAA
Locus tag: CLONEX_02290
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
Locus tag: CLONEX_02289
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU-pdxU -97 9.4 AACTGGACT-(15)-AACTGGTAT-(8)-ATACCAGAA CLONEX_02290
Clostridium scindens ATCC 35704
Position: -199
Score: 10.1202
Sequence: AACTGGCCT-(15)-ATCTGGACT-(8)-CATCCACTT
Locus tag: CLOSCI_00017
Name: pdxK
Funciton: Pyridoxal kinase (EC 2.7.1.35)
Locus tag: CLOSCI_00016
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxK-pdxU -199 10.1 AACTGGCCT-(15)-ATCTGGACT-(8)-CATCCACTT CLOSCI_00017
Dorea longicatena DSM 13814
Position: -63
Score: 10.2113
Sequence: AACTGGTAT-(15)-AACTGGCTC-(8)-ATGCCACTA
Locus tag: DORLON_00405
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -63 10.2 AACTGGTAT-(15)-AACTGGCTC-(8)-ATGCCACTA DORLON_00405
Eubacterium rectale ATCC 33656
Position: -170
Score: 10.5529
Sequence: AACTGGATA-(15)-AATTGGATA-(8)-ATGCCACAT
Locus tag: EUBREC_0262
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -170 10.6 AACTGGATA-(15)-AATTGGATA-(8)-ATGCCACAT EUBREC_0262
Ruminococcus gnavus ATCC 29149
Position: -75
Score: 10.8696
Sequence: AACTGGACT-(15)-AACTGGACA-(8)-TATCCACTT
Locus tag: RUMGNA_02238
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -75 10.9 AACTGGACT-(15)-AACTGGACA-(8)-TATCCACTT RUMGNA_02238
Ruminococcus lactaris ATCC 29176
Position: -93
Score: 8.79778
Sequence: ATCTGACCT-(15)-AATTGACCA-(8)-GGTTCACAT
Locus tag: RUMLAC_01106
Name: pdxU
Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
pdxU -93 8.8 ATCTGACCT-(15)-AATTGACCA-(8)-GGTTCACAT RUMLAC_01106
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