Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pdxS gene

Properties
Regulog: PdxR - Clostridia-3
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Phylum: Firmicutes
Built upon 21 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Dorea formicigenerans ATCC 27755
Position: -141
Score: 12.2906
Sequence: AACTGGCTT-(15)-AACTGGATA-(8)-ATACCAGTT
Locus tag: DORFOR_02364
Name: pdxS
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: DORFOR_02363
Name: pdxT
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
pdxS-pdxT -141 12.3 AACTGGCTT-(15)-AACTGGATA-(8)-ATACCAGTT DORFOR_02364
Dorea longicatena DSM 13814
Position: -56
Score: 12.0638
Sequence: AACTGGTAT-(15)-AACTGGATG-(8)-ATACCAGAT
Locus tag: DORLON_00259
Name: pdxS
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: DORLON_00260
Name: pdxT
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
pdxS-pdxT -56 12.1 AACTGGTAT-(15)-AACTGGATG-(8)-ATACCAGAT DORLON_00259
Eubacterium eligens ATCC 27750
Position: -106
Score: 12.0483
Sequence: TTCTGGCAT-(15)-AATTGGATA-(8)-TGACCAGTT
Locus tag: EUBELI_20439
Name: pdxS
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: EUBELI_20440
Name: pdxT
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
pdxS-pdxT -106 12 TTCTGGCAT-(15)-AATTGGATA-(8)-TGACCAGTT EUBELI_20439
Roseburia intestinalis L1-82
Position: -7
Score: 11.9189
Sequence: AACTGGCAT-(15)-AACTGGATG-(8)-CATCCAGTT
Locus tag: ROSINTL182_03667
Name: null
Funciton: hypothetical protein
Locus tag: ROSINTL182_03666
Name: pdxS
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: ROSINTL182_03665
Name: pdxT
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
ROSINTL182_03667-pdxS-pdxT -7 11.9 AACTGGCAT-(15)-AACTGGATG-(8)-CATCCAGTT ROSINTL182_03667
Ruminococcus gnavus ATCC 29149
Position: -101
Score: 11.5154
Sequence: AACTGGCAT-(15)-AACTGGATG-(8)-AAGCCAATC
Locus tag: RUMGNA_01775
Name: pdxS
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: RUMGNA_01774
Name: pdxT
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
pdxS-pdxT -101 11.5 AACTGGCAT-(15)-AACTGGATG-(8)-AAGCCAATC RUMGNA_01775
Ruminococcus lactaris ATCC 29176
Position: -132
Score: 10.3666
Sequence: TTCTGACCT-(15)-AATTGAATA-(8)-TAGTCACAA
Locus tag: RUMLAC_01874
Name: pdxS
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Locus tag: RUMLAC_01875
Name: pdxT
Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
pdxS-pdxT -132 10.4 TTCTGACCT-(15)-AATTGAATA-(8)-TAGTCACAA RUMLAC_01874