Orthologous regulated operons containing speB gene

Properties
Regulog:	GabR2 - Comamonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Gamma-aminobutyrate utilization
Effector:	Gamma-aminobutyric acid
Phylum:	Proteobacteria/Beta

Built upon 4 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Polaromonas naphthalenivorans CJ2
Position: -149 Score: 15.3325 Sequence: GTGTGTAGAGGT-(6)-GGCAGCACAGTA-(18)-ATCTGTATATGG Locus tag: Pnap_2630 Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Locus tag: Pnap_2631 Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component Locus tag: Pnap_2632 Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein Locus tag: Pnap_2633 Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Pnap_2634 Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Pnap_2635 Name: speB Funciton: Agmatinase (EC 3.5.3.11) Locus tag: Pnap_2636 Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gbtA-gbtD-gbtB-gbtC-speB-gabD	-149	15.3	GTGTGTAGAGGT-(6)-GGCAGCACAGTA-(18)-ATCTGTATATGG	Pnap_2630
Rhodoferax ferrireducens DSM 15236
Position: -126 Score: 15.3325 Sequence: GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG Locus tag: Rfer_0592 Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Locus tag: Rfer_0593 Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component Locus tag: Rfer_0594 Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein Locus tag: Rfer_0595 Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Rfer_0596 Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Rfer_0597 Name: speB Funciton: Agmatinase (EC 3.5.3.11) Locus tag: Rfer_0598 Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gbtA-gbtD-gbtB-gbtC-speB-gabD	-126	15.3	GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG	Rfer_0592
Variovorax paradoxus S110
Position: -120 Score: 14.8447 Sequence: GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG Locus tag: Vapar_4695 Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Locus tag: Vapar_4696 Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component Locus tag: Vapar_4697 Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein Locus tag: Vapar_4698 Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Vapar_4699 Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Vapar_4700 Name: speB Funciton: Agmatinase (EC 3.5.3.11)
gabT-gbtA-gbtD-gbtB-gbtC-speB	-120	14.8	GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG	Vapar_4695