Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gbtA gene

Properties
Regulog: GabR2 - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector: Gamma-aminobutyric acid
Phylum: Proteobacteria/Beta
Built upon 4 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Polaromonas naphthalenivorans CJ2
Position: -149
Score: 15.3325
Sequence: GTGTGTAGAGGT-(6)-GGCAGCACAGTA-(18)-ATCTGTATATGG
Locus tag: Pnap_2630
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Pnap_2631
Name: gbtA
Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Pnap_2632
Name: gbtD
Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Pnap_2633
Name: gbtB
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Pnap_2634
Name: gbtC
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Pnap_2635
Name: speB
Funciton: Agmatinase (EC 3.5.3.11)
Locus tag: Pnap_2636
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gbtA-gbtD-gbtB-gbtC-speB-gabD -149 15.3 GTGTGTAGAGGT-(6)-GGCAGCACAGTA-(18)-ATCTGTATATGG Pnap_2630
Polaromonas sp. JS666
Position: -122
Score: 14.8333
Sequence: CCATGTACAGCA-(6)-ACCCGCACAGTG-(17)-AGCTGTACATGG
Locus tag: Bpro_2912
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Bpro_2913
Name: gbtA
Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Bpro_2914
Name: gbtD
Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Bpro_2915
Name: gbtB
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Bpro_2916
Name: gbtC
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
gabT-gbtA-gbtD-gbtB-gbtC -122 14.8 CCATGTACAGCA-(6)-ACCCGCACAGTG-(17)-AGCTGTACATGG Bpro_2912
Rhodoferax ferrireducens DSM 15236
Position: -126
Score: 15.3325
Sequence: GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG
Locus tag: Rfer_0592
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Rfer_0593
Name: gbtA
Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Rfer_0594
Name: gbtD
Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Rfer_0595
Name: gbtB
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Rfer_0596
Name: gbtC
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Rfer_0597
Name: speB
Funciton: Agmatinase (EC 3.5.3.11)
Locus tag: Rfer_0598
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT-gbtA-gbtD-gbtB-gbtC-speB-gabD -126 15.3 GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG Rfer_0592
Variovorax paradoxus S110
Position: -120
Score: 14.8447
Sequence: GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG
Locus tag: Vapar_4695
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: Vapar_4696
Name: gbtA
Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: Vapar_4697
Name: gbtD
Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: Vapar_4698
Name: gbtB
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Vapar_4699
Name: gbtC
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: Vapar_4700
Name: speB
Funciton: Agmatinase (EC 3.5.3.11)
gabT-gbtA-gbtD-gbtB-gbtC-speB -120 14.8 GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG Vapar_4695