Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Pden_3389 gene

Properties
Regulog: Pden_3389 - Rhodobacterales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glycolate utilization; Lactate utilization
Effector:
Phylum: Proteobacteria/Alpha
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -58
Score: 4.15816
Sequence: ATTATGCATACAATCG
Locus tag: Jann_1163
Name: dld2
Funciton: D-lactate dehydrogenase, alternative
Locus tag: Jann_1164
Name: Pden_3389
Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family
Locus tag: Jann_1165
Name: Jann_1165
Funciton: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
dld2-Pden_3389-Jann_1165 -58 4.2 ATTATGCATACAATCG Jann_1163
Paracoccus denitrificans PD1222
Position: -184
Score: 3.94864
Sequence: ACATTGCATGCAATGT
Position: -100
Score: 4.06799
Sequence: TGTTTGCATGCAACTG
Position: -38
Score: 4.45277
Sequence: AGATTGCATGCAACTT
Locus tag: Pden_3389
Name: Pden_3389
Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family
Pden_3389 -184 3.9 ACATTGCATGCAATGT Pden_3389
-100 4.1 TGTTTGCATGCAACTG
-38 4.5 AGATTGCATGCAACTT
Roseovarius nubinhibens ISM
Position: -110
Score: 4.77773
Sequence: ATAATGAATGCATTTT
Position: -14
Score: 4.63656
Sequence: ATAGTGAATGCAAAAT
Locus tag: ISM_03985
Name: Pden_3389
Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family
Locus tag: ISM_03980
Name: Jann_1165
Funciton: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
Pden_3389-Jann_1165 -110 4.8 ATAATGAATGCATTTT ISM_03985
-14 4.6 ATAGTGAATGCAAAAT
Roseovarius sp. 217
Position: -71
Score: 3.93977
Sequence: TTGTTGAATTGAATTC
Position: -66
Score: 3.84485
Sequence: GAATTGAATTCTGAAT
Position: -59
Score: 4.82514
Sequence: ATTCTGAATTCAATAT
Locus tag: ROS217_09190
Name: dld2
Funciton: D-lactate dehydrogenase, alternative
Locus tag: ROS217_09195
Name: Pden_3389
Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family
dld2-Pden_3389 -71 3.9 TTGTTGAATTGAATTC ROS217_09190
-66 3.8 GAATTGAATTCTGAAT
-59 4.8 ATTCTGAATTCAATAT