Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing CD1609 gene

Properties
Regulog: YhcF - Clostridia-2
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Multidrug resistance; Multidrug efflux
Effector:
Phylum: Firmicutes
Built upon 10 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium difficile 630
Position: -113
Score: 5.89536
Sequence: AGTGTATTAATCGTATAATACACT
Position: -39
Score: 6.17787
Sequence: AGTGTACTATCGTATTAATACACT
Locus tag: CD1606
Name: yhcF2
Funciton: Transcriptional regulator, GntR family
Locus tag: CD1607
Name: yhcG
Funciton: ABC-type multidrug transport system, ATPase component
Locus tag: CD1608
Name: yhcI
Funciton: ABC-type multidrug transport system, permease component
Locus tag: CD1609
Name: null
Funciton: hypothetical protein
Locus tag: CD1610
Name: yhcI
Funciton: ABC-type multidrug transport system, permease component
Locus tag: CD1611
Name: null
Funciton: hypothetical protein
yhcF2-yhcG-yhcI-CD1609-yhcI-CD1611 -113 5.9 AGTGTATTAATCGTATAATACACT CD1606
-39 6.2 AGTGTACTATCGTATTAATACACT
Clostridium hiranonis DSM 13275
Position: -242
Score: 5.29158
Sequence: GGTGTACTACCATTATAATACAGT
Position: -94
Score: 4.80579
Sequence: TGTGTACTACACAGATAATACGCT
Position: -40
Score: 5.63723
Sequence: AGTGTACCACATAAATAGTACACC
Locus tag: CLOHIR_00582
Name: yhcF2
Funciton: Transcriptional regulator, GntR family
Locus tag: CLOHIR_00581
Name: yhcG
Funciton: ABC-type multidrug transport system, ATPase component
Locus tag: CLOHIR_00580
Name: yhcI
Funciton: ABC-type multidrug transport system, permease component
Locus tag: CLOHIR_00579
Name: null
Funciton: hypothetical protein
Locus tag: CLOHIR_00578
Name: yhcI
Funciton: ABC-type multidrug transport system, permease component
Locus tag: CLOHIR_00577
Name: null
Funciton: hypothetical protein
yhcF2-yhcG-yhcI-CLOHIR_00579-yhcI-CLOHIR_00577 -242 5.3 GGTGTACTACCATTATAATACAGT CLOHIR_00582
-94 4.8 TGTGTACTACACAGATAATACGCT
-40 5.6 AGTGTACCACATAAATAGTACACC