Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF10777 gene

Properties
Regulog: YdcR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Built upon 13 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -76
Score: 8.52024
Sequence: AACTGTTATGATAAA-(9)-ATCTGTTACTTTTTT
Locus tag: CKO_02694
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -76 8.5 AACTGTTATGATAAA-(9)-ATCTGTTACTTTTTT CKO_02694
Enterobacter sp. 638
Position: -104
Score: 8.76846
Sequence: AACTGTTATGCTTTT-(9)-AACTGTTACTTTTTT
Locus tag: Ent638_0938
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -104 8.8 AACTGTTATGCTTTT-(9)-AACTGTTACTTTTTT Ent638_0938
Erwinia amylovora ATCC 49946
Position: -97
Score: 7.90452
Sequence: CACTGTTATAGCTTA-(9)-AACTGTGTCTGCTGT
Locus tag: EAM_2946
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -97 7.9 CACTGTTATAGCTTA-(9)-AACTGTGTCTGCTGT EAM_2946
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -121
Score: 8.87487
Sequence: AACTGTTATAGCCAA-(9)-AACTGTATCTGTTAT
Locus tag: ECA3006
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -121 8.9 AACTGTTATAGCCAA-(9)-AACTGTATCTGTTAT ECA3006
Escherichia coli str. K-12 substr. MG1655
Position: -103
Score: 6.80413
Sequence: AACTGTTATGCAAAA-(9)-ATCTGTTACTTCCCC
Locus tag: b0458
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -103 6.8 AACTGTTATGCAAAA-(9)-ATCTGTTACTTCCCC b0458
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -134
Score: 8.22731
Sequence: AACTGTTATGCTTTT-(9)-ATCTGTTACTTTCTC
Locus tag: KPN_00439
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -134 8.2 AACTGTTATGCTTTT-(9)-ATCTGTTACTTTCTC KPN_00439
Salmonella typhimurium LT2
Position: -106
Score: 8.53802
Sequence: AACTGTTATGCTAAT-(9)-ATCTGTTACTTTTTT
Locus tag: STM0471
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -106 8.5 AACTGTTATGCTAAT-(9)-ATCTGTTACTTTTTT STM0471
Serratia proteamaculans 568
Position: -53
Score: 6.11864
Sequence: AACTGATCTACCTGC-(9)-ACTTGTGTTAGTTTG
Locus tag: Spro_1865
Name: PF10777
Funciton: Extracytoplasmic function sigma factor YlaC
PF10777 -53 6.1 AACTGATCTACCTGC-(9)-ACTTGTGTTAGTTTG Spro_1865
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