Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing dnaJ gene

Properties
Regulog: HrcA - Micrococcineae
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Actinobacteria
Built upon 66 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Arthrobacter chlorophenolicus A6
Position: -110
Score: 6.24363
Sequence: TTAGCACTTAGGCATGTCGAGTGCTAA
Locus tag: Achl_1973
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Achl_1972
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Achl_1971
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -110 6.2 TTAGCACTTAGGCATGTCGAGTGCTAA Achl_1973
Arthrobacter sp. FB24
Position: -95
Score: 6.25461
Sequence: TTAGCACTTAGACATGTCGAGTGCTAA
Locus tag: Arth_2236
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Arth_2235
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Arth_2234
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -95 6.3 TTAGCACTTAGACATGTCGAGTGCTAA Arth_2236
Beutenbergia cavernae DSM 12333
Position: -47
Score: 6.40594
Sequence: TTGGCACTCGGCCCGGGTGAGTGCTGG
Locus tag: Bcav_1748
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Bcav_1749
Name: dnaJ
Funciton: Chaperone protein DnaJ
hrcA-dnaJ -47 6.4 TTGGCACTCGGCCCGGGTGAGTGCTGG Bcav_1748
Brachybacterium faecium DSM 4810
Position: -98
Score: 5.98638
Sequence: TTGGCACCTGGCACGGCAGAGTGCCAG
Locus tag: Bfae_17300
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Bfae_17290
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Bfae_17280
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -98 6 TTGGCACCTGGCACGGCAGAGTGCCAG Bfae_17300
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Position: -39
Score: 5.86703
Sequence: TTGGCAGTCAGAACCGACGAGTGCCAG
Locus tag: CMM_1564
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: CMM_1565
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: CMM_1566
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -39 5.9 TTGGCAGTCAGAACCGACGAGTGCCAG CMM_1564
Janibacter sp. HTCC2649
Position: -48
Score: 6.24417
Sequence: TTGGCACTCACCAAGCATGAGTGCCAG
Locus tag: JNB_05025
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: JNB_05020
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: JNB_05015
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -48 6.2 TTGGCACTCACCAAGCATGAGTGCCAG JNB_05025
Jonesia denitrificans DSM 20603
Position: -50
Score: 6.62301
Sequence: TTGGCACTCGGCAGTGGGGAGTGCCAA
Locus tag: Jden_1550
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Jden_1549
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Jden_1548
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -50 6.6 TTGGCACTCGGCAGTGGGGAGTGCCAA Jden_1550
Kocuria rhizophila DC2201
Position: -90
Score: 6.08158
Sequence: TTAGCACTGTGCGCGGATGAGTGCCAA
Locus tag: KRH_13010
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: KRH_13000
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: KRH_12990
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -90 6.1 TTAGCACTGTGCGCGGATGAGTGCCAA KRH_13010
Kytococcus sedentarius DSM 20547
Position: -75
Score: 5.87878
Sequence: CTGGCACTTGACGTCCCCGAGTGCCAG
Locus tag: Ksed_11690
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Ksed_11700
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Ksed_11710
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -75 5.9 CTGGCACTTGACGTCCCCGAGTGCCAG Ksed_11690
Leifsonia xyli subsp. xyli str. CTCB07
Position: -49
Score: 6.48651
Sequence: TTGGCACTCAGGATCAGCGAGTGCTAA
Locus tag: Lxx14650
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: Lxx14640
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: Lxx14630
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -49 6.5 TTGGCACTCAGGATCAGCGAGTGCTAA Lxx14650
Renibacterium salmoninarum ATCC 33209
Position: -233
Score: 6.53907
Sequence: TTAGCACTTGGGCAAGCCGAGTGCTAA
Locus tag: RSal33209_1927
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: RSal33209_1926
Name: dnaJ
Funciton: Chaperone protein DnaJ
Locus tag: RSal33209_1925
Name: rsmE
Funciton: 16S ribosomal RNA methyltransferase
hrcA-dnaJ-rsmE -233 6.5 TTAGCACTTGGGCAAGCCGAGTGCTAA RSal33209_1927
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