Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhiF gene

Properties
Regulog: RhaR - Frankineae/Propionibacterineae/Pseudonocardiaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Actinobacteria
Built upon 10 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Actinosynnema mirum DSM 43827
Position: -132
Score: 4.74619
Sequence: CCTGTGAACCGATTCAACGC
Position: -34
Score: 5.07539
Sequence: GGCTTGAACCGATTCAACCA
Locus tag: Amir_0970
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: Amir_0971
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: Amir_0972
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
Locus tag: Amir_0973
Name: null
Funciton: hypothetical protein
Locus tag: Amir_0974
Name: rhaM
Funciton: L-rhamnose mutarotase
Locus tag: Amir_0975
Name: rhaR
Funciton: Transcriptional regulator of rhamnose utilization, LacI family
rhiL-rhiF-rhiG-Amir_0973-rhaM-rhaR -132 4.7 CCTGTGAACCGATTCAACGC Amir_0970
-34 5.1 GGCTTGAACCGATTCAACCA