Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rafY gene

Properties
Regulog: RafR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Raffinose utilization
Effector: Raffinose
Phylum: Proteobacteria/gamma
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Enterobacter sp. 638
Position: -75
Score: 6.08979
Sequence: AATCCGAAACGTTTGGGTTG
Position: -54
Score: 6.41527
Sequence: TATCCGAAACGTTTCGGATC
Locus tag: Ent638_4077
Name: rafA
Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: Ent638_4076
Name: rafY
Funciton: Raffinose permease
rafA-rafY -75 6.1 AATCCGAAACGTTTGGGTTG Ent638_4077
-54 6.4 TATCCGAAACGTTTCGGATC
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -90
Score: 4.9691
Sequence: TTTCTTAAACGTTTAAGTTG
Position: -69
Score: 4.88333
Sequence: TCACTTAAACGTTTAAGTTT
Locus tag: ECA0754
Name: rafA
Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: ECA0753
Name: rafY
Funciton: Raffinose permease
rafA-rafY -90 5 TTTCTTAAACGTTTAAGTTG ECA0754
-69 4.9 TCACTTAAACGTTTAAGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -75
Score: 6.10104
Sequence: GATCCGAAACGTTTTGGTTG
Position: -54
Score: 6.63607
Sequence: CATCCGAAACGTTTCGGATC
Locus tag: KPN_04203
Name: rafA
Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: KPN_04204
Name: rafY
Funciton: Raffinose permease
rafA-rafY -75 6.1 GATCCGAAACGTTTTGGTTG KPN_04203
-54 6.6 CATCCGAAACGTTTCGGATC
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