Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing omp gene

Properties
Regulog: XCC2209 - Xanthomonadales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Proteobacteria/gamma
Built upon 22 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Stenotrophomonas maltophilia K279a
Position: -46
Score: 5.65592
Sequence: AGATGGAAACGCTTACATTC
Locus tag: Smlt3255
Name: XCC2209
Funciton: Transcriptional regulator, LacI family
Locus tag: Smlt3254
Name: omp
Funciton: Putative carbohydrate outer membrane transporter, TonB-dependent
XCC2209-omp -46 5.7 AGATGGAAACGCTTACATTC Smlt3255
Xanthomonas axonopodis pv. citri str. 306
Position: -106
Score: 5.56585
Sequence: ATCTGTAAGCGTTTTCACGC
Position: -60
Score: 5.52803
Sequence: GTATGAAAACGCTTACAGTC
Locus tag: XAC2313
Name: XCC2209
Funciton: Transcriptional regulator, LacI family
Locus tag: XAC2312
Name: omp
Funciton: Putative carbohydrate outer membrane transporter, TonB-dependent
XCC2209-omp -106 5.6 ATCTGTAAGCGTTTTCACGC XAC2313
-60 5.5 GTATGAAAACGCTTACAGTC
Xanthomonas campestris pv. campestris str. ATCC 33913
Position: -107
Score: 5.50786
Sequence: ATCTGTAAGCGTTTTCACAA
Position: -61
Score: 5.52803
Sequence: GTATGAAAACGCTTACAGTC
Locus tag: XCC2209
Name: XCC2209
Funciton: Transcriptional regulator, LacI family
Locus tag: XCC2208
Name: omp
Funciton: Putative carbohydrate outer membrane transporter, TonB-dependent
XCC2209-omp -107 5.5 ATCTGTAAGCGTTTTCACAA XCC2209
-61 5.5 GTATGAAAACGCTTACAGTC
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