Orthologous regulated operons containing rpoH gene

Properties
Regulog:	HrcA - Comamonadaceae
Regulator type:	Transcription factor
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Phylum:	Proteobacteria/beta

Built upon 22 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -57 Score: 6.54908 Sequence: TTAGCACTCCCTCCAAGAGACTGCTAA Locus tag: Aave_3894 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-57	6.5	TTAGCACTCCCTCCAAGAGACTGCTAA	Aave_3894
Acidovorax sp. JS42
Position: -28 Score: 6.97499 Sequence: TTAGCACTCTCTCCAATGGAGTGCTAA Locus tag: Ajs_3522 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-28	7	TTAGCACTCTCTCCAATGGAGTGCTAA	Ajs_3522
Comamonas testosteroni KF-1
Position: -28 Score: 6.83008 Sequence: TTAGCACTCTCTCTAACGGAGTGCTAA Locus tag: CtesDRAFT_2864 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-28	6.8	TTAGCACTCTCTCTAACGGAGTGCTAA	CtesDRAFT_2864
Delftia acidovorans SPH-1
Position: -57 Score: 6.99195 Sequence: TTAGCACTCGGTCATAACGAGTGCTAA Locus tag: Daci_1694 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-57	7	TTAGCACTCGGTCATAACGAGTGCTAA	Daci_1694
Leptothrix cholodnii SP-6
Position: -59 Score: 6.9416 Sequence: TTAGCACTCTCGAGGGTCGAGTGCTAA Locus tag: Lcho_3542 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-59	6.9	TTAGCACTCTCGAGGGTCGAGTGCTAA	Lcho_3542
Methylibium petroleiphilum PM1
Position: -54 Score: 7.17409 Sequence: TTAGCACTCGTTTTACGTGAGTGCTAA Locus tag: Mpe_A3171 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-54	7.2	TTAGCACTCGTTTTACGTGAGTGCTAA	Mpe_A3171
Polaromonas naphthalenivorans CJ2
Position: -57 Score: 6.00645 Sequence: CTGGCACTCTCTCTGATGGAGTGCTAA Locus tag: Pnap_0889 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-57	6	CTGGCACTCTCTCTGATGGAGTGCTAA	Pnap_0889
Polaromonas sp. JS666
Position: -57 Score: 6.97499 Sequence: TTAGCACTCTCTCCAATGGAGTGCTAA Locus tag: Bpro_1256 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-57	7	TTAGCACTCTCTCCAATGGAGTGCTAA	Bpro_1256
Rhodoferax ferrireducens DSM 15236
Position: -58 Score: 7.13299 Sequence: TTAGCACTCTCTCTCATAGAGTGCTAA Locus tag: Rfer_1692 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-58	7.1	TTAGCACTCTCTCTCATAGAGTGCTAA	Rfer_1692
Variovorax paradoxus S110
Position: -55 Score: 6.91404 Sequence: TTAGCACTCCCTCCAATCGAGTGCTAA Locus tag: Vapar_4379 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-55	6.9	TTAGCACTCCCTCCAATCGAGTGCTAA	Vapar_4379
Verminephrobacter eiseniae EF01-2
Position: -72 Score: 6.60359 Sequence: TTGGCACTCGATCGCAGAGAGTGCTAA Locus tag: Veis_4476 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH	-72	6.6	TTGGCACTCGATCGCAGAGAGTGCTAA	Veis_4476

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing rpoH gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --