Orthologous regulated operons containing plyC1 gene

Properties
Regulog:	HTCS_Rgu-1 - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum:	Bacteroidetes

Built upon 26 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacteroides ovatus ATCC 8483
Position: -128 Score: 9.53095 Sequence: CAAAAAATACGA-(9)-CAAATATTGCAC Locus tag: BACOVA_04911 Name: susC_Rgu-1 Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides Locus tag: BACOVA_04910 Name: susD_Rgu-1 Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers Locus tag: BACOVA_04909 Name: BT4112 Funciton: Predicted pectin lyase Locus tag: BACOVA_04908 Name: pemC Funciton: Pectinesterase (EC 3.1.1.11) Locus tag: BACOVA_04907 Name: plyC1 Funciton: Pectate lyase C Locus tag: BACOVA_04906 Name: plyC1 Funciton: Pectate lyase C Locus tag: BACOVA_04905 Name: plyC1 Funciton: Pectate lyase C
susC_Rgu-1-susD_Rgu-1-BT4112-pemC-plyC1-plyC1-plyC1	-128	9.5	CAAAAAATACGA-(9)-CAAATATTGCAC	BACOVA_04911
Bacteroides thetaiotaomicron VPI-5482
Position: -119 Score: 9.8102 Sequence: CAAAAAATACAA-(9)-CAAATATTGCAC Locus tag: BT4116 Name: plyC1 Funciton: Pectate lyase C Locus tag: BT4115 Name: plyC1 Funciton: Pectate lyase C
plyC1-plyC1	-119	9.8	CAAAAAATACAA-(9)-CAAATATTGCAC	BT4116

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --