Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsD2 gene

Properties
Regulog: Zur - Clostridia-1
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Built upon 46 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -193
Score: 5.35974
Sequence: TAATTGATAATTATTATCATATG
Position: -111
Score: 5.40737
Sequence: CAAATGAAAAATATTCTCATTTA
Locus tag: CAC1478
Name: rpsD2
Funciton: SSU ribosomal protein S4p paralog
rpsD2 -193 5.4 TAATTGATAATTATTATCATATG CAC1478
-111 5.4 CAAATGAAAAATATTCTCATTTA
Clostridium botulinum A str. ATCC 3502
Position: -92
Score: 5.84578
Sequence: ATATTGAAAATCATTTTCAGTTT
Locus tag: CBO3405
Name: rpsD2
Funciton: SSU ribosomal protein S4p paralog
rpsD2 -92 5.8 ATATTGAAAATCATTTTCAGTTT CBO3405
Clostridium butyricum 5521
Position: -101
Score: 5.62275
Sequence: AAAATGATAATGAATTTCATTTA
Position: -95
Score: 5.11667
Sequence: ATAATGAATTTCATTTACATTTA
Locus tag: CBY_3339
Name: rpsD2
Funciton: SSU ribosomal protein S4p paralog
rpsD2 -101 5.6 AAAATGATAATGAATTTCATTTA CBY_3339
-95 5.1 ATAATGAATTTCATTTACATTTA
Clostridium kluyveri DSM 555
Position: -152
Score: 5.78945
Sequence: ATATTGAACATCATTTTCAATTA
Locus tag: CKL_2190
Name: rpsD2
Funciton: SSU ribosomal protein S4p paralog
rpsD2 -152 5.8 ATATTGAACATCATTTTCAATTA CKL_2190
Clostridium perfringens ATCC 13124
Position: -81
Score: 5.84592
Sequence: ATAATGATAATCATTTTCAATAA
Locus tag: CPF_2668
Name: rpsD2
Funciton: SSU ribosomal protein S4p paralog
rpsD2 -81 5.8 ATAATGATAATCATTTTCAATAA CPF_2668
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