Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmF2 gene

Properties
Regulog: Zur - Actinobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Built upon 69 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Actinosynnema mirum DSM 43827
Position: -53
Score: 5.52795
Sequence: AAATGACAATCGTTTCCGTTA
Locus tag: Amir_4416
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: Amir_4415
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: Amir_4414
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -53 5.5 AAATGACAATCGTTTCCGTTA Amir_4416
Propionibacterium acnes KPA171202
Position: -44
Score: 4.97672
Sequence: ATATGATAATGATTCTCATAT
Locus tag: PPA2158
Name: rpmB2
Funciton: LSU ribosomal protein L28p
Locus tag: PPA2160
Name: rpmG2
Funciton: LSU ribosomal protein L33p
Locus tag: PPA2161
Name: rpsN2
Funciton: SSU ribosomal protein S14p (S29e)
Locus tag: PPA2162
Name: rpmF2
Funciton: LSU ribosomal protein L32p
rpmB2-rpmG2-rpsN2-rpmF2 -44 5 ATATGATAATGATTCTCATAT PPA2158
Rhodococcus sp. RHA1
Position: -83
Score: 5.40215
Sequence: TGATGACAATCATTTTCGACA
Position: -29
Score: 5.41032
Sequence: TAATGACAATCGTTATCGAAA
Locus tag: RHA1_ro05618
Name: null
Funciton: hypothetical protein
Locus tag: RHA1_ro05619
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: RHA1_ro05620
Name: rpmF2
Funciton: LSU ribosomal protein L32p
RHA1_ro05618-rpmE2-rpmF2 -83 5.4 TGATGACAATCATTTTCGACA RHA1_ro05618
-29 5.4 TAATGACAATCGTTATCGAAA
Saccharopolyspora erythraea NRRL 2338
Position: -66
Score: 5.46565
Sequence: TAACGACATCCGTTTTCATTA
Position: -12
Score: 4.95307
Sequence: AAATGAAAACCGTTGCCGACT
Locus tag: SACE_0755
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: SACE_0756
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: SACE_0757
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -66 5.5 TAACGACATCCGTTTTCATTA SACE_0755
-12 5 AAATGAAAACCGTTGCCGACT
Streptomyces coelicolor A3(2)
Position: -56
Score: 4.63956
Sequence: ACATGAACATCGTTTTCATGT
Locus tag: SCO0436
Name: rpmF2
Funciton: LSU ribosomal protein L32p
rpmF2 -56 4.6 ACATGAACATCGTTTTCATGT SCO0436