Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nirD2 gene

Properties
Regulog: NarP - Vibrionales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Phylum: Proteobacteria
Built upon 135 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -262
Score: 4.85982
Sequence: TACTACTAAAGGGTTA
Locus tag: PBPRA2524
Name: cysG2
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: PBPRA2523
Name: nirB2
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: PBPRA2522
Name: nirD2
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: PBPRA2521
Name: narK2
Funciton: Nitrate/nitrite antiporter
cysG2-nirB2-nirD2-narK2 -262 4.9 TACTACTAAAGGGTTA PBPRA2524
Vibrio shilonii AK1
Position: -285
Score: 5.30814
Sequence: TACCACTaaAGTGGTA
Locus tag: VSAK1_03740
Name: cysG2
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: VSAK1_03745
Name: nirB2
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VSAK1_03750
Name: nirD2
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VSAK1_03755
Name: narK2
Funciton: Nitrate/nitrite antiporter
cysG2-nirB2-nirD2-narK2 -285 5.3 TACCACTaaAGTGGTA VSAK1_03740
Vibrio splendidus LGP32
Position: -249
Score: 5.38733
Sequence: TACCACTTTAGGGGTA
Locus tag: VS_II1027
Name: nirB2
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: VS_II1028
Name: nirD2
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
Locus tag: VS_II1029
Name: narK2
Funciton: Nitrate/nitrite antiporter
nirB2-nirD2-narK2 -249 5.4 TACCACTTTAGGGGTA VS_II1027
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