Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3890 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -128
Score: 4.66014
Sequence: TAATTTGATGTGAATCAACTTT
Locus tag: Sama_0550
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -128 4.7 TAATTTGATGTGAATCAACTTT Sama_0550
Shewanella baltica OS155
Position: -196
Score: 3.69134
Sequence: CTCTGTGATCTTGGTCGTATTC
Locus tag: Sbal_3564
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -196 3.7 CTCTGTGATCTTGGTCGTATTC Sbal_3564
Shewanella oneidensis MR-1
Position: -196
Score: 4.63865
Sequence: CCATGTGATCTGGTTCAAATTT
Locus tag: SO3890
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -196 4.6 CCATGTGATCTGGTTCAAATTT SO3890
Shewanella putrefaciens CN-32
Position: -185
Score: 4.42861
Sequence: TTGTGTGACACGAATCAAGTTT
Locus tag: Sputcn32_0776
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -185 4.4 TTGTGTGACACGAATCAAGTTT Sputcn32_0776
Shewanella sp ANA-3
Position: -181
Score: 4.8846
Sequence: CTGTGTGATGTGGTTCAAATTT
Locus tag: Shewana3_0739
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -181 4.9 CTGTGTGATGTGGTTCAAATTT Shewana3_0739
Shewanella sp MR-4
Position: -198
Score: 4.25712
Sequence: CCCTGTGATCTAGCTCAAATTT
Locus tag: Shewmr4_3223
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -198 4.3 CCCTGTGATCTAGCTCAAATTT Shewmr4_3223
Shewanella sp MR-7
Position: -198
Score: 4.25712
Sequence: CCCTGTGATCTAGCTCAAATTT
Locus tag: Shewmr7_0766
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -198 4.3 CCCTGTGATCTAGCTCAAATTT Shewmr7_0766
Shewanella sp W3-18-1
Position: -185
Score: 4.42861
Sequence: TTGTGTGACACGAATCAAGTTT
Locus tag: Sputw3181_3399
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890 -185 4.4 TTGTGTGACACGAATCAAGTTT Sputw3181_3399
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