Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3553 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -82
Score: 4.12356
Sequence: AAATTTGCCAAAGCTCACACAT
Locus tag: Sama_1067
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sama_1066
Name: null
Funciton: hypothetical protein
Locus tag: Sama_1065
Name: null
Funciton: L-sorbosone dehydrogenase
Locus tag: Sama_1064
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sama_1063
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sama_1062
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-Sama_1066-Sama_1065-purE-purK-SO3556 -82 4.1 AAATTTGCCAAAGCTCACACAT Sama_1067
Shewanella frigidimarina NCIMB 400
Position: -116
Score: 4.47739
Sequence: TAATGTGATGATAATTATATTA
Locus tag: Sfri_3674
Name: SO3553
Funciton: putative sulfate permease
SO3553 -116 4.5 TAATGTGATGATAATTATATTA Sfri_3674
Shewanella oneidensis MR-1
Position: -70
Score: 3.91137
Sequence: TTTTGCAACTATGATCACACAA
Locus tag: SO3553
Name: SO3553
Funciton: putative sulfate permease
Locus tag: SO3554
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: SO3555
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: SO3556
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 3.9 TTTTGCAACTATGATCACACAA SO3553
Shewanella putrefaciens CN-32
Position: -81
Score: 3.95475
Sequence: ATTTGCAATCATGATCACACAG
Locus tag: Sputcn32_1042
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sputcn32_1041
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sputcn32_1040
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sputcn32_1039
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -81 4 ATTTGCAATCATGATCACACAG Sputcn32_1042
Shewanella sediminis HAW-EB3
Position: -233
Score: 4.0599
Sequence: GTAAGTGCTACGCATCACATTT
Locus tag: Ssed_1334
Name: SO3553
Funciton: putative sulfate permease
SO3553 -233 4.1 GTAAGTGCTACGCATCACATTT Ssed_1334
Shewanella sp ANA-3
Position: -70
Score: 3.91137
Sequence: TTTTGCAACTATGATCACACAA
Locus tag: Shewana3_3154
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Shewana3_3155
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Shewana3_3156
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Shewana3_3157
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 3.9 TTTTGCAACTATGATCACACAA Shewana3_3154
Shewanella sp MR-4
Position: -70
Score: 4.47087
Sequence: TTTTGTAACTATGATCACACAA
Locus tag: Shewmr4_2974
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Shewmr4_2975
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Shewmr4_2976
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Shewmr4_2977
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 4.5 TTTTGTAACTATGATCACACAA Shewmr4_2974
Shewanella sp MR-7
Position: -70
Score: 4.47087
Sequence: TTTTGTAACTATGATCACACAA
Locus tag: Shewmr7_3056
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Shewmr7_3057
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Shewmr7_3058
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Shewmr7_3059
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -70 4.5 TTTTGTAACTATGATCACACAA Shewmr7_3056
Shewanella sp W3-18-1
Position: -81
Score: 3.95475
Sequence: ATTTGCAATCATGATCACACAG
Locus tag: Sputw3181_3123
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sputw3181_3124
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sputw3181_3125
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sputw3181_3126
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553-purE-purK-SO3556 -81 4 ATTTGCAATCATGATCACACAG Sputw3181_3123
Shewanella woodyi ATCC 51908
Position: -288
Score: 3.72381
Sequence: TCCAGCGACTTAGATCACATTT
Locus tag: Swoo_3320
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Swoo_3321
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Swoo_3322
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
SO3553-purE-purK -288 3.7 TCCAGCGACTTAGATCACATTT Swoo_3320
© 2009-2020 RegPrecise