Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing frdA gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -105
Score: 4.07763
Sequence: TCAATTGATCTGGCTCACGTTT
Locus tag: Sbal_3936
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Sbal_3935
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sbal_3934
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -105 4.1 TCAATTGATCTGGCTCACGTTT Sbal_3936
Shewanella frigidimarina NCIMB 400
Position: -135
Score: 3.84565
Sequence: TTGTGTGACCCGCTTCTAACTC
Position: -103
Score: 3.8207
Sequence: ATAGGTGAACATTATCACGGTT
Locus tag: Sfri_0456
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Sfri_0457
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sfri_0458
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -135 3.8 TTGTGTGACCCGCTTCTAACTC Sfri_0456
-103 3.8 ATAGGTGAACATTATCACGGTT
Shewanella halifaxensis HAW-EB4
Position: -94
Score: 4.0655
Sequence: TTTGTTGATCTATCTCACGGTT
Locus tag: Shal_3898
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Shal_3897
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shal_3896
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -94 4.1 TTTGTTGATCTATCTCACGGTT Shal_3898
Shewanella loihica PV-4
Position: -98
Score: 4.43817
Sequence: TGTTTTGATCTATCTCACGGTT
Locus tag: Shew_0333
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Shew_0334
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shew_0335
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -98 4.4 TGTTTTGATCTATCTCACGGTT Shew_0333
Shewanella oneidensis MR-1
Position: -79
Score: 3.93419
Sequence: ATTTGTGAGCGATATTAATTTT
Locus tag: SO0397
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: SO0398
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: SO0399
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -79 3.9 ATTTGTGAGCGATATTAATTTT SO0397
Shewanella pealeana ATCC 700345
Position: -94
Score: 4.0655
Sequence: TTTGTTGATCTATCTCACGGTT
Locus tag: Spea_0393
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Spea_0394
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Spea_0395
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -94 4.1 TTTGTTGATCTATCTCACGGTT Spea_0393
Shewanella piezotolerans WP3
Position: -94
Score: 3.87027
Sequence: TTTGTTGATCTATCTCACTGTT
Locus tag: swp_0429
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: swp_0430
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: swp_0431
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -94 3.9 TTTGTTGATCTATCTCACTGTT swp_0429
Shewanella putrefaciens CN-32
Position: -67
Score: 4.12941
Sequence: ATTTGTGAGCGATATTAACTTT
Locus tag: Sputcn32_3440
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Sputcn32_3439
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sputcn32_3438
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -67 4.1 ATTTGTGAGCGATATTAACTTT Sputcn32_3440
Shewanella sediminis HAW-EB3
Position: -104
Score: 4.38735
Sequence: TGTTTTGATCTGCCTCACGGTT
Position: -74
Score: 3.91454
Sequence: ATATGTGAGCGACATTATGATT
Locus tag: Ssed_4115
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Ssed_4114
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Ssed_4113
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -104 4.4 TGTTTTGATCTGCCTCACGGTT Ssed_4115
-74 3.9 ATATGTGAGCGACATTATGATT
Shewanella sp ANA-3
Position: -77
Score: 3.93419
Sequence: ATTTGTGAGCGATATTAATTTT
Locus tag: Shewana3_0402
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Shewana3_0403
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shewana3_0404
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -77 3.9 ATTTGTGAGCGATATTAATTTT Shewana3_0402
Shewanella sp MR-4
Position: -77
Score: 3.93419
Sequence: ATTTGTGAGCGATATTAATTTT
Locus tag: Shewmr4_0403
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Shewmr4_0404
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shewmr4_0405
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -77 3.9 ATTTGTGAGCGATATTAATTTT Shewmr4_0403
Shewanella sp MR-7
Position: -76
Score: 3.93419
Sequence: ATTTGTGAGCGATATTAATTTT
Locus tag: Shewmr7_3622
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Shewmr7_3621
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Shewmr7_3620
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -76 3.9 ATTTGTGAGCGATATTAATTTT Shewmr7_3622
Shewanella sp W3-18-1
Position: -67
Score: 4.12941
Sequence: ATTTGTGAGCGATATTAACTTT
Locus tag: Sputw3181_0499
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Sputw3181_0500
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sputw3181_0501
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -67 4.1 ATTTGTGAGCGATATTAACTTT Sputw3181_0499
Shewanella woodyi ATCC 51908
Position: -109
Score: 4.70641
Sequence: TGATTTGATCTGTCTCACAGTA
Position: -79
Score: 3.99093
Sequence: ATTTGTGAGCGACATTATCTAA
Locus tag: Swoo_0508
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Swoo_0509
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Swoo_0510
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC-frdA-frdB -109 4.7 TGATTTGATCTGTCTCACAGTA Swoo_0508
-79 4 ATTTGTGAGCGACATTATCTAA
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