Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3551 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -192
Score: 4.19458
Sequence: ATGTGTGAGCTTTGGCAAATTT
Locus tag: Sama_1068
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Sama_1069
Name: null
Funciton: hypothetical protein
SO3551-Sama_1069 -192 4.2 ATGTGTGAGCTTTGGCAAATTT Sama_1068
Shewanella baltica OS155
Position: -126
Score: 3.8319
Sequence: CAGTGTGATCTTGTCAGCAAAA
Locus tag: Sbal_1038
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Sbal_1039
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Sbal_1040
Name: null
Funciton: hypothetical protein
SO3552-SO3551-Sbal_1040 -126 3.8 CAGTGTGATCTTGTCAGCAAAA Sbal_1038
Shewanella halifaxensis HAW-EB4
Position: -269
Score: 4.35424
Sequence: TTGTGGGATCTAGGTAACATTT
Locus tag: Shal_1245
Name: null
Funciton: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Locus tag: Shal_1246
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Shal_1247
Name: null
Funciton: hypothetical protein
Shal_1245-SO3551-Shal_1247 -269 4.4 TTGTGGGATCTAGGTAACATTT Shal_1245
Shewanella oneidensis MR-1
Position: -152
Score: 4.05102
Sequence: TTGTGTGATCATAGTTGCAAAA
Locus tag: SO3552
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: SO3551
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: SO3550
Name: null
Funciton: hypothetical protein
SO3552-SO3551-SO3550 -152 4.1 TTGTGTGATCATAGTTGCAAAA SO3552
Shewanella putrefaciens CN-32
Position: -143
Score: 4.03094
Sequence: CTGTGTGATCATGATTGCAAAT
Locus tag: Sputcn32_1043
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Sputcn32_1044
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Sputcn32_1045
Name: null
Funciton: hypothetical protein
SO3552-SO3551-Sputcn32_1045 -143 4 CTGTGTGATCATGATTGCAAAT Sputcn32_1043
Shewanella sediminis HAW-EB3
Position: -273
Score: 4.39877
Sequence: AAATGTGATGCGTAGCACTTAC
Locus tag: Ssed_1335
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Ssed_1336
Name: null
Funciton: hypothetical protein
SO3551-Ssed_1336 -273 4.4 AAATGTGATGCGTAGCACTTAC Ssed_1335
Shewanella sp ANA-3
Position: -165
Score: 4.05102
Sequence: TTGTGTGATCATAGTTGCAAAA
Locus tag: Shewana3_3153
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Shewana3_3152
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Shewana3_3151
Name: null
Funciton: hypothetical protein
SO3552-SO3551-Shewana3_3151 -165 4.1 TTGTGTGATCATAGTTGCAAAA Shewana3_3153
Shewanella sp MR-4
Position: -165
Score: 4.40044
Sequence: TTGTGTGATCATAGTTACAAAA
Locus tag: Shewmr4_2973
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Shewmr4_2972
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Shewmr4_2971
Name: null
Funciton: hypothetical protein
SO3552-SO3551-Shewmr4_2971 -165 4.4 TTGTGTGATCATAGTTACAAAA Shewmr4_2973
Shewanella sp MR-7
Position: -165
Score: 4.40044
Sequence: TTGTGTGATCATAGTTACAAAA
Locus tag: Shewmr7_3055
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Shewmr7_3054
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Shewmr7_3053
Name: null
Funciton: hypothetical protein
SO3552-SO3551-Shewmr7_3053 -165 4.4 TTGTGTGATCATAGTTACAAAA Shewmr7_3055
Shewanella sp W3-18-1
Position: -143
Score: 4.03094
Sequence: CTGTGTGATCATGATTGCAAAT
Locus tag: Sputw3181_3122
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Sputw3181_3121
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Sputw3181_3120
Name: null
Funciton: hypothetical protein
SO3552-SO3551-Sputw3181_3120 -143 4 CTGTGTGATCATGATTGCAAAT Sputw3181_3122