Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing yceI gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -105
Score: 4.67624
Sequence: TTAGGTGATGTGGGTCACGTTT
Locus tag: Sbal_1772
Name: yceI
Funciton: hypothetical protein
Locus tag: Sbal_1773
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -105 4.7 TTAGGTGATGTGGGTCACGTTT Sbal_1772
Shewanella pealeana ATCC 700345
Position: -166
Score: 3.83614
Sequence: TTACGTGCTGAATTGCAAAATT
Position: -69
Score: 3.81606
Sequence: AATTGTTACGCATCTTACGCTA
Locus tag: Spea_2476
Name: yceI
Funciton: hypothetical protein
Locus tag: Spea_2475
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -166 3.8 TTACGTGCTGAATTGCAAAATT Spea_2476
-69 3.8 AATTGTTACGCATCTTACGCTA
Shewanella piezotolerans WP3
Position: -42
Score: 3.79306
Sequence: TACATTGATATCTATCACTATT
Locus tag: swp_3020
Name: yceI
Funciton: hypothetical protein
Locus tag: swp_3019
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -42 3.8 TACATTGATATCTATCACTATT swp_3020
Shewanella putrefaciens CN-32
Position: -70
Score: 3.77562
Sequence: TAAATGGATGTAAATCACGATT
Locus tag: Sputcn32_1651
Name: yceI
Funciton: hypothetical protein
Locus tag: Sputcn32_1652
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -70 3.8 TAAATGGATGTAAATCACGATT Sputcn32_1651
Shewanella sp ANA-3
Position: -102
Score: 4.61453
Sequence: TTAGGTGATCTTTGTCACAGAT
Locus tag: Shewana3_1628
Name: yceI
Funciton: hypothetical protein
Locus tag: Shewana3_1629
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -102 4.6 TTAGGTGATCTTTGTCACAGAT Shewana3_1628
Shewanella sp MR-4
Position: -103
Score: 4.83478
Sequence: TTAGGTGATCTTTGTCACAAAT
Locus tag: Shewmr4_1561
Name: yceI
Funciton: hypothetical protein
Locus tag: Shewmr4_1562
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -103 4.8 TTAGGTGATCTTTGTCACAAAT Shewmr4_1561
Shewanella sp MR-7
Position: -103
Score: 4.83478
Sequence: TTAGGTGATCTTTGTCACAAAT
Locus tag: Shewmr7_1636
Name: yceI
Funciton: hypothetical protein
Locus tag: Shewmr7_1637
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -103 4.8 TTAGGTGATCTTTGTCACAAAT Shewmr7_1636
Shewanella sp W3-18-1
Position: -70
Score: 3.77562
Sequence: TAAATGGATGTAAATCACGATT
Locus tag: Sputw3181_2375
Name: yceI
Funciton: hypothetical protein
Locus tag: Sputw3181_2374
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI-SO2891 -70 3.8 TAAATGGATGTAAATCACGATT Sputw3181_2375
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