Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Sputcn32_0834 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella denitrificans OS217
Position: -175
Score: 4.00133
Sequence: TAATGTGATTGGTATAAGAACA
Locus tag: Sden_3048
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: Sden_3049
Name: asnC
Funciton: regulatory protein AsnC
Sputcn32_0834-asnC -175 4 TAATGTGATTGGTATAAGAACA Sden_3048
Shewanella pealeana ATCC 700345
Position: -161
Score: 4.28008
Sequence: TATCGATATCTGCCTCACATAT
Position: -7
Score: 3.76387
Sequence: ATTTATTATGGAAGTCCCATTT
Locus tag: Spea_0741
Name: null
Funciton: hypothetical protein
Locus tag: Spea_0740
Name: null
Funciton: methyltransferase type 12
Locus tag: Spea_0739
Name: null
Funciton: hypothetical protein
Locus tag: Spea_0738
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: Spea_0737
Name: asnC
Funciton: regulatory protein AsnC
Spea_0741-Spea_0740-Spea_0739-Sputcn32_0834-asnC -161 4.3 TATCGATATCTGCCTCACATAT Spea_0741
-7 3.8 ATTTATTATGGAAGTCCCATTT
Shewanella piezotolerans WP3
Position: -322
Score: 3.85784
Sequence: TAATGCAATTGGTATTACAATA
Locus tag: swp_4339
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: swp_4340
Name: asnC
Funciton: regulatory protein AsnC
Sputcn32_0834-asnC -322 3.9 TAATGCAATTGGTATTACAATA swp_4339
Shewanella sp ANA-3
Position: -156
Score: 4.19724
Sequence: AAAGGTGACGAGTATAACAAAA
Locus tag: Shewana3_0799
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: Shewana3_0798
Name: asnC
Funciton: regulatory protein AsnC
Sputcn32_0834-asnC -156 4.2 AAAGGTGACGAGTATAACAAAA Shewana3_0799
Shewanella sp MR-4
Position: -156
Score: 4.19724
Sequence: AAAGGTGACGAGTATAACAAAA
Locus tag: Shewmr4_3139
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: Shewmr4_3140
Name: asnC
Funciton: regulatory protein AsnC
Sputcn32_0834-asnC -156 4.2 AAAGGTGACGAGTATAACAAAA Shewmr4_3139
Shewanella sp MR-7
Position: -156
Score: 4.19724
Sequence: AAAGGTGACGAGTATAACAAAA
Locus tag: Shewmr7_0827
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: Shewmr7_0826
Name: asnC
Funciton: regulatory protein AsnC
Sputcn32_0834-asnC -156 4.2 AAAGGTGACGAGTATAACAAAA Shewmr7_0827
Shewanella woodyi ATCC 51908
Position: -67
Score: 3.73566
Sequence: TATTTTTACTTGCCTCAACTAA
Locus tag: Swoo_0917
Name: Sputcn32_0834
Funciton: ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Locus tag: Swoo_0916
Name: asnC
Funciton: regulatory protein AsnC
Sputcn32_0834-asnC -67 3.7 TATTTTTACTTGCCTCAACTAA Swoo_0917
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