Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rarD gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -85
Score: 4.2445
Sequence: CAGAGTGATTCAAGTCACACTT
Locus tag: Shal_2568
Name: rarD
Funciton: RarD protein
rarD -85 4.2 CAGAGTGATTCAAGTCACACTT Shal_2568
Shewanella pealeana ATCC 700345
Position: -85
Score: 3.9001
Sequence: CAAGGTGATTCAAGTCACACTC
Locus tag: Spea_1861
Name: rarD
Funciton: RarD protein
rarD -85 3.9 CAAGGTGATTCAAGTCACACTC Spea_1861
Shewanella sediminis HAW-EB3
Position: -88
Score: 4.77918
Sequence: TAGAGTGATCCAGCTCACATAC
Locus tag: Ssed_0706
Name: rarD
Funciton: RarD protein
rarD -88 4.8 TAGAGTGATCCAGCTCACATAC Ssed_0706
Shewanella woodyi ATCC 51908
Position: -44
Score: 4.50668
Sequence: CATAGTGATCAATATCACATTC
Locus tag: Swoo_4258
Name: rarD
Funciton: RarD protein
rarD -44 4.5 CATAGTGATCAATATCACATTC Swoo_4258
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