Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO3797 gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -36
Score: 4.29117
Sequence: AAATGGGATGTAAATAACGTAA
Locus tag: Shal_0814
Name: null
Funciton: nitroreductase
Locus tag: Shal_0815
Name: null
Funciton: Cupin 2 conserved barrel domain protein
Locus tag: Shal_0816
Name: SO3797
Funciton: probable collagenase (EC 3.4.24.3)
Shal_0814-Shal_0815-SO3797 -36 4.3 AAATGGGATGTAAATAACGTAA Shal_0814
Shewanella loihica PV-4
Position: -26
Score: 3.74513
Sequence: ATCTGTGATCTGATTCGAGACT
Locus tag: Shew_0818
Name: SO3797
Funciton: probable collagenase (EC 3.4.24.3)
SO3797 -26 3.7 ATCTGTGATCTGATTCGAGACT Shew_0818
Shewanella oneidensis MR-1
Position: -53
Score: 4.48418
Sequence: TTTTGTTATACTCGTCACCTTT
Locus tag: SO3797
Name: SO3797
Funciton: probable collagenase (EC 3.4.24.3)
SO3797 -53 4.5 TTTTGTTATACTCGTCACCTTT SO3797
Shewanella sp ANA-3
Position: -53
Score: 4.48418
Sequence: TTTTGTTATACTCGTCACCTTT
Locus tag: Shewana3_0800
Name: SO3797
Funciton: probable collagenase (EC 3.4.24.3)
SO3797 -53 4.5 TTTTGTTATACTCGTCACCTTT Shewana3_0800
Shewanella sp MR-4
Position: -53
Score: 4.48418
Sequence: TTTTGTTATACTCGTCACCTTT
Locus tag: Shewmr4_3138
Name: SO3797
Funciton: probable collagenase (EC 3.4.24.3)
SO3797 -53 4.5 TTTTGTTATACTCGTCACCTTT Shewmr4_3138
Shewanella sp MR-7
Position: -53
Score: 4.48418
Sequence: TTTTGTTATACTCGTCACCTTT
Locus tag: Shewmr7_0828
Name: SO3797
Funciton: probable collagenase (EC 3.4.24.3)
SO3797 -53 4.5 TTTTGTTATACTCGTCACCTTT Shewmr7_0828
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