Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pepQ gene

Properties
Regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Built upon 2713 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -109
Score: 4.02086
Sequence: CTTTGTGATACACTGCACAGCA
Locus tag: Sama_0033
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sama_0034
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sama_0035
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Sama_0036
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -109 4 CTTTGTGATACACTGCACAGCA Sama_0033
Shewanella baltica OS155
Position: -302
Score: 4.1807
Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sbal_0022
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sbal_0023
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sbal_0024
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Sbal_0025
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -302 4.2 CTTTGTGATACACTGCACAGAG Sbal_0022
Shewanella halifaxensis HAW-EB4
Position: -250
Score: 4.00906
Sequence: CAGTGTGCGACTAATCACAAAA
Locus tag: Shal_0017
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shal_0018
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shal_0019
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Shal_0020
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -250 4 CAGTGTGCGACTAATCACAAAA Shal_0017
Shewanella oneidensis MR-1
Position: -237
Score: 4.40096
Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: SO0022
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: SO0023
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: SO0024
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: SO0025
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -237 4.4 CTTTGTGATACACTGCACAAAG SO0022
Shewanella pealeana ATCC 700345
Position: -252
Score: 4.08273
Sequence: CAGTGTGCGACGAATCACAAAA
Locus tag: Spea_0019
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Spea_0020
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Spea_0021
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Spea_0022
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -252 4.1 CAGTGTGCGACGAATCACAAAA Spea_0019
Shewanella putrefaciens CN-32
Position: -302
Score: 4.1807
Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sputcn32_0014
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sputcn32_0015
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sputcn32_0016
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Sputcn32_0017
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -302 4.2 CTTTGTGATACACTGCACAGAG Sputcn32_0014
Shewanella sediminis HAW-EB3
Position: -48
Score: 3.80986
Sequence: TTTTCTGATAGATTTTACATCA
Locus tag: Ssed_0024
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Ssed_0025
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Ssed_0026
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Ssed_0027
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -48 3.8 TTTTCTGATAGATTTTACATCA Ssed_0024
Shewanella sp ANA-3
Position: -255
Score: 4.40096
Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: Shewana3_0025
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shewana3_0026
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shewana3_0027
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Shewana3_0028
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -255 4.4 CTTTGTGATACACTGCACAAAG Shewana3_0025
Shewanella sp MR-4
Position: -255
Score: 4.40096
Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: Shewmr4_0019
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shewmr4_0020
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shewmr4_0021
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Shewmr4_0022
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -255 4.4 CTTTGTGATACACTGCACAAAG Shewmr4_0019
Shewanella sp MR-7
Position: -255
Score: 4.40096
Sequence: CTTTGTGATACACTGCACAAAG
Locus tag: Shewmr7_0017
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Shewmr7_0018
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Shewmr7_0019
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Shewmr7_0020
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -255 4.4 CTTTGTGATACACTGCACAAAG Shewmr7_0017
Shewanella sp W3-18-1
Position: -302
Score: 4.1807
Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sputw3181_0014
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sputw3181_0015
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sputw3181_0016
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Sputw3181_0017
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ-SO0023-trkH-1-hemG -302 4.2 CTTTGTGATACACTGCACAGAG Sputw3181_0014
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