Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing MED134_10421 gene

Regulog: PaaR - Flavobacteria
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Bacteroidetes
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Kordia algicida OT-1
Position: -44
Score: 6.29508
Locus tag: KAOT1_20492
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.
Locus tag: KAOT1_20497
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: KAOT1_20502
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: KAOT1_20507
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: KAOT1_20512
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: KAOT1_20517
Name: paaG
Funciton: Enoyl-CoA hydratase (EC
Locus tag: KAOT1_20522
Name: null
Funciton: hypothetical protein
Locus tag: KAOT1_20527
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC
Locus tag: KAOT1_20532
Name: MED134_10421
Funciton: hypothetical protein
Locus tag: KAOT1_20537
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: KAOT1_20542
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
paaE-paaA-paaB-paaC-paaD-paaG-KAOT1_20522-paaH-MED134_10421-paaY-paaJ -44 6.3 CAAACTAACAATTGTTAG KAOT1_20492