Orthologous regulated operons containing paaF gene

Properties
Regulog:	PaaR - Flavobacteria
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Phylum:	Bacteroidetes

Built upon 8 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Cellulophaga sp. MED134
Position: -42 Score: 5.53632 Sequence: TTAACTAACAATCGTTAG Locus tag: MED134_11666 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-. Locus tag: MED134_11671 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: MED134_11676 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: MED134_11681 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: MED134_11686 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: MED134_11691 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: MED134_11696 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Locus tag: MED134_11701 Name: paaY Funciton: thioesterase superfamily protein Locus tag: MED134_11706 Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Locus tag: MED134_11711 Name: null Funciton: Probable short-chain dehydrogenase Locus tag: MED134_11716 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Locus tag: MED134_11721 Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaE-paaA-paaB-paaC-paaD-paaG-paaH-paaY-paaJ-MED134_11711-paaZ-paaF	-42	5.5	TTAACTAACAATCGTTAG	MED134_11666
Flavobacteriales bacterium ALC-1
Position: -39 Score: 6.24534 Sequence: CAAACTAACAAGTGTTAG Locus tag: FBALC1_14257 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-. Locus tag: FBALC1_14252 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: FBALC1_14247 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: FBALC1_14242 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: FBALC1_14237 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: FBALC1_14232 Name: null Funciton: hypothetical protein Locus tag: FBALC1_14227 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: FBALC1_14222 Name: null Funciton: serine racemase Locus tag: FBALC1_14217 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Locus tag: FBALC1_14212 Name: paaY Funciton: thioesterase superfamily protein Locus tag: FBALC1_14207 Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Locus tag: FBALC1_14202 Name: null Funciton: Probable short-chain dehydrogenase Locus tag: FBALC1_14197 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Locus tag: FBALC1_14192 Name: null Funciton: hypothetical protein Locus tag: FBALC1_14187 Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: FBALC1_14182 Name: paaY2 Funciton: Phenylacetic acid degradation protein PaaY
paaE-paaA-paaB-paaC-paaD-FBALC1_14232-paaG-FBALC1_14222-paaH-paaY-paaJ-FBALC1_14202-paaZ-FBALC1_14192-paaF-paaY2	-39	6.2	CAAACTAACAAGTGTTAG	FBALC1_14257
Psychroflexus torquis ATCC 700755
Position: -41 Score: 5.44702 Sequence: TAAACTAACAATCGTTAG Locus tag: P700755_04168 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-. Locus tag: P700755_04163 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: P700755_04158 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: P700755_04153 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: P700755_04148 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: P700755_04143 Name: paaG Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: P700755_04138 Name: null Funciton: hypothetical protein Locus tag: P700755_04133 Name: paaH Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Locus tag: P700755_04128 Name: paaY Funciton: thioesterase superfamily protein Locus tag: P700755_04123 Name: paaJ Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) Locus tag: P700755_04118 Name: null Funciton: hypothetical protein Locus tag: P700755_04113 Name: null Funciton: acetyl-CoA acetyltransferase Locus tag: P700755_04108 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ Locus tag: P700755_04103 Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaE-paaA-paaB-paaC-paaD-paaG-P700755_04138-paaH-paaY-paaJ-P700755_04118-P700755_04113-paaZ-paaF	-41	5.4	TAAACTAACAATCGTTAG	P700755_04168