Orthologous regulated operons containing paaD gene

Properties
Regulog:	PaaR - Rhizobiales
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Phylum:	Alphaproteobacteria

Built upon 14 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Rhizobium sp. NGR234
Position: -53 Score: 5.72292 Sequence: TCTGACCGATCGGTCGGTTAAT Locus tag: NGR_c26200 Name: blr2890 Funciton: putative beta-ketoadipyl CoA thiolase Locus tag: NGR_c26190 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: NGR_c26180 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: NGR_c26170 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: NGR_c26160 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: NGR_c26150 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) Locus tag: NGR_c26140 Name: null Funciton: ring-oxidation complex protein 1 in the phenylacetic acid catabolism pathway Locus tag: NGR_c26130 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
blr2890-paaA-paaB-paaC-paaD-paaE-NGR_c26140-paaZ	-53	5.7	TCTGACCGATCGGTCGGTTAAT	NGR_c26200
Rhodopseudomonas palustris CGA009
Position: -53 Score: 5.90246 Sequence: ATTGACCGTCCAATTGGTCAAT Locus tag: RPA3768 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: RPA3767 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: RPA3766 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: RPA3765 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: RPA3764 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA-paaB-paaC-paaD-paaE	-53	5.9	ATTGACCGTCCAATTGGTCAAT	RPA3768
Xanthobacter autotrophicus Py2
Position: -118 Score: 6.65276 Sequence: ATTGACCGACCGGATGGTCAAT Position: -60 Score: 5.29137 Sequence: ATTGATCGACCAGACGGACAAT Locus tag: Xaut_0894 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family Locus tag: Xaut_0895 Name: paaX Funciton: Phenylacetic acid degradation operon negative regulatory protein PaaX Locus tag: Xaut_0896 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: Xaut_0897 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: Xaut_0898 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: Xaut_0899 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: Xaut_0900 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaR-paaX-paaA-paaB-paaC-paaD-paaE	-118	6.7	ATTGACCGACCGGATGGTCAAT	Xaut_0894
	-60	5.3	ATTGATCGACCAGACGGACAAT