Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaD gene

Properties
Regulog: PaaR - Deinococcus-Thermus
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Deinococcus-Thermus
Built upon 4 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Thermus aquaticus Y51MC23
Position: -20
Score: 6.41068
Sequence: CTAACAAGCGATCGTTAG
Locus tag: TaqDRAFT_5253
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
Locus tag: TaqDRAFT_5254
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: TaqDRAFT_5255
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: TaqDRAFT_5256
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: TaqDRAFT_5257
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: TaqDRAFT_5258
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
paaR-paaA-paaB-paaC-paaD-paaZ -20 6.4 CTAACAAGCGATCGTTAG TaqDRAFT_5253
Thermus thermophilus HB27
Position: -20
Score: 6.14488
Sequence: CTAACAAACGACCGTTAG
Locus tag: TTC0609
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
Locus tag: TTC0608
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: TTC0607
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: TTC0606
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: TTC0605
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: TTC0604
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
paaR-paaA-paaB-paaC-paaD-paaZ -20 6.1 CTAACAAACGACCGTTAG TTC0609