Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing liuB gene

Properties
Regulog: LiuQ - Comamonadaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Leptothrix cholodnii SP-6
Position: -175
Score: 5.54039
Sequence: TTGAGTATCACTCAA
Position: -62
Score: 4.988
Sequence: TTGAGTAAAGCTCAT
Locus tag: Lcho_2119
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Lcho_2118
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Lcho_2117
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Lcho_2116
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Lcho_2115
Name: liuE
Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuA-liuB-liuC-liuD-liuE -175 5.5 TTGAGTATCACTCAA Lcho_2119
-62 5 TTGAGTAAAGCTCAT
Methylibium petroleiphilum PM1
Position: -114
Score: 5.36516
Sequence: TTGAGTAAAGCTCAA
Position: -13
Score: 5.1281
Sequence: TTGAGTGAAACTCAT
Locus tag: Mpe_A3360
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Mpe_A3359
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Mpe_A3358
Name: liuC
Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Mpe_A3357
Name: null
Funciton: Probable transmembrane protein
Locus tag: Mpe_A3356
Name: liuD
Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
liuA-liuB-liuC-Mpe_A3357-liuD -114 5.4 TTGAGTAAAGCTCAA Mpe_A3360
-13 5.1 TTGAGTGAAACTCAT