Orthologous regulated operons containing pydB gene

Properties
Regulog:	RutR - Burkholderia
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor (activator)
Biological process:	Pyrimidine utilization
Effector:	Uracil
Phylum:	Proteobacteria/beta

Built upon 12 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -188 Score: 6.8329 Sequence: ACCTGTCCAATCGGACAGGA Locus tag: Bamb_5967 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: Bamb_5966 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: Bamb_5965 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) Locus tag: Bamb_5964 Name: pydP Funciton: Pyrimidine permease in reductive pathway Locus tag: Bamb_5963 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
pydC-pydX-pydA-pydP-pydB	-188	6.8	ACCTGTCCAATCGGACAGGA	Bamb_5967
Burkholderia phymatum STM815
Position: -200 Score: 6.50528 Sequence: ACCTGTCCATTCGGACAGGA Locus tag: Bphy_1536 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: Bphy_1535 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: Bphy_1534 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) Locus tag: Bphy_1533 Name: pydP Funciton: Pyrimidine permease in reductive pathway Locus tag: Bphy_1532 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
pydC-pydX-pydA-pydP-pydB	-200	6.5	ACCTGTCCATTCGGACAGGA	Bphy_1536
Burkholderia sp. 383
Position: -180 Score: 6.8329 Sequence: ACCTGTCCAATCGGACAGGA Locus tag: Bcep18194_C6654 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: Bcep18194_C6655 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: Bcep18194_C6656 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) Locus tag: Bcep18194_C6657 Name: pydP Funciton: Pyrimidine permease in reductive pathway Locus tag: Bcep18194_C6658 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
pydC-pydX-pydA-pydP-pydB	-180	6.8	ACCTGTCCAATCGGACAGGA	Bcep18194_C6654
Burkholderia vietnamiensis G4
Position: -186 Score: 6.8329 Sequence: ACCTGTCCAATCGGACAGGA Locus tag: Bcep1808_5509 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: Bcep1808_5510 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: Bcep1808_5511 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) Locus tag: Bcep1808_5512 Name: pydP Funciton: Pyrimidine permease in reductive pathway Locus tag: Bcep1808_5513 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
pydC-pydX-pydA-pydP-pydB	-186	6.8	ACCTGTCCAATCGGACAGGA	Bcep1808_5509
Burkholderia xenovorans LB400
Position: -168 Score: 6.64833 Sequence: ACCTGTCCAACTGGACAGGA Locus tag: Bxe_A1427 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: Bxe_A1428 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: Bxe_A1429 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2); Dihydroorotate dehydrogenase (EC 1.3.3.1) Locus tag: Bxe_A1430 Name: pydP Funciton: Pyrimidine permease in reductive pathway Locus tag: Bxe_A1431 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
pydC-pydX-pydA-pydP-pydB	-168	6.6	ACCTGTCCAACTGGACAGGA	Bxe_A1427