Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF03060 gene

Properties
Regulog: LiuR - Rhizobiales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/alpha
Built upon 84 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -37
Score: 4.68405
Sequence: ACTTACGTGCGCGTAAAC
Locus tag: Atu0415
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
PF03060 -37 4.7 ACTTACGTGCGCGTAAAC Atu0415
Brucella melitensis 16M
Position: 10
Score: 5.51297
Sequence: TATTACGTTTACGGAAAC
Locus tag: BMEII0460
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
PF03060 10 5.5 TATTACGTTTACGGAAAC BMEII0460
Rhizobium etli CFN 42
Position: -37
Score: 5.7711
Sequence: ATTGACGTTTTCGTAAAC
Locus tag: RHE_CH00505
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
PF03060 -37 5.8 ATTGACGTTTTCGTAAAC RHE_CH00505
Rhizobium leguminosarum bv. viciae 3841
Position: -37
Score: 5.7711
Sequence: ATTGACGTTTTCGTAAAC
Locus tag: RL0537
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
PF03060 -37 5.8 ATTGACGTTTTCGTAAAC RL0537
Rhizobium sp. NGR234
Position: -47
Score: 6.13672
Sequence: ATTGACGTTTACGCAAAC
Position: -41
Score: 4.56773
Sequence: GTTTACGCAAACGTCAAA
Locus tag: NGR_c01400
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
PF03060 -47 6.1 ATTGACGTTTACGCAAAC NGR_c01400
-41 4.6 GTTTACGCAAACGTCAAA
Sinorhizobium meliloti 1021
Position: -45
Score: 5.36291
Sequence: TTTGACGTTTACGAGAAC
Position: -39
Score: 4.69167
Sequence: GTTTACGAGAACGTCAAA
Locus tag: SMc02150
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
PF03060 -45 5.4 TTTGACGTTTACGAGAAC SMc02150
-39 4.7 GTTTACGAGAACGTCAAA
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