Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ivdB gene

Properties
Regulog: LiuR - Various betaproteobacteria
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chromobacterium violaceum ATCC 12472
Position: -66
Score: 6.08613
Sequence: GTTGACGTTGACGTAAAC
Position: -60
Score: 5.46161
Sequence: GTTGACGTAAACGTCAAG
Locus tag: CV2086
Name: ivdG
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: CV2085
Name: ivdB
Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
Locus tag: CV2084
Name: ivdC
Funciton: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
Locus tag: CV2083
Name: ivdE
Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Locus tag: CV2082
Name: ivdD
Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
Locus tag: CV2081
Name: ivdF
Funciton: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
ivdG-ivdB-ivdC-ivdE-ivdD-ivdF -66 6.1 GTTGACGTTGACGTAAAC CV2086
-60 5.5 GTTGACGTAAACGTCAAG
Laribacter hongkongensis HLHK9
Position: -62
Score: 5.39433
Sequence: GTTTACGTTCACGTAAAT
Locus tag: LHK_00209
Name: lcfA
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: LHK_00210
Name: livG
Funciton: Branched-chain amino acid ABC transport system, ATP-binding protein LivG
Locus tag: LHK_00211
Name: livH
Funciton: Branched-chain amino acid ABC transport system, permease protein LivH
Locus tag: LHK_00212
Name: livM
Funciton: Branched-chain amino acid ABC transport system, permease protein LivM
Locus tag: LHK_00213
Name: livK
Funciton: Branched-chain amino acid ABC transport system, substrate-binding protein LivK
Locus tag: LHK_00214
Name: livF
Funciton: Branched-chain amino acid ABC transport system, ATP-binding protein LivF
Locus tag: LHK_00215
Name: paaK
Funciton: Putative phenylacetate-CoA ligase
Locus tag: LHK_00216
Name: ivdB
Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
Locus tag: LHK_00217
Name: ivdC
Funciton: Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
Locus tag: LHK_00218
Name: ivdE
Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Locus tag: LHK_00219
Name: ivdD
Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
Locus tag: LHK_00220
Name: ivdF
Funciton: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
lcfA-livG-livH-livM-livK-livF-paaK-ivdB-ivdC-ivdE-ivdD-ivdF -62 5.4 GTTTACGTTCACGTAAAT LHK_00209