Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mcm gene

Properties
Regulog: LiuR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 59 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Leptothrix cholodnii SP-6
Position: -78
Score: 5.72995
Sequence: TATGACGTTTACGTAAAC
Position: -72
Score: 5.34588
Sequence: GTTTACGTAAACGTCAAT
Locus tag: Lcho_3844
Name: mcm
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
mcm -78 5.7 TATGACGTTTACGTAAAC Lcho_3844
-72 5.3 GTTTACGTAAACGTCAAT
Polaromonas naphthalenivorans CJ2
Position: -81
Score: 6.58437
Sequence: GTTGACGTTTACGTAAAC
Position: -75
Score: 4.78422
Sequence: GTTTACGTAAACGTAATA
Locus tag: Pnap_3524
Name: mcm
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
mcm -81 6.6 GTTGACGTTTACGTAAAC Pnap_3524
-75 4.8 GTTTACGTAAACGTAATA
Polaromonas sp. JS666
Position: -47
Score: 6.63969
Sequence: ATTGACGTTTACGTAAAC
Position: -41
Score: 5.72216
Sequence: GTTTACGTAAACGTCAAC
Locus tag: Bpro_4054
Name: mcm
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
mcm -47 6.6 ATTGACGTTTACGTAAAC Bpro_4054
-41 5.7 GTTTACGTAAACGTCAAC
Rhodoferax ferrireducens DSM 15236
Position: -91
Score: 6.63969
Sequence: ATTGACGTTTACGTAAAC
Position: -85
Score: 5.14609
Sequence: GTTTACGTAAACGTCAAG
Locus tag: Rfer_3612
Name: mcm
Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
mcm -91 6.6 ATTGACGTTTACGTAAAC Rfer_3612
-85 5.1 GTTTACGTAAACGTCAAG