Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing acdH gene

Properties
Regulog: LiuR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Built upon 59 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax sp. JS42
Position: -45
Score: 5.14609
Sequence: GTTTACGTAAACGTCAAG
Locus tag: Ajs_2810
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Ajs_2809
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Ajs_2808
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
etfB-etfA-acdH -45 5.1 GTTTACGTAAACGTCAAG Ajs_2810
Comamonas testosteroni KF-1
Position: -172
Score: 5.06344
Sequence: CATTCCGTTTACGTAAAC
Position: -166
Score: 5.14609
Sequence: GTTTACGTAAACGTCAAA
Locus tag: CtesDRAFT_1104
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
acdH -172 5.1 CATTCCGTTTACGTAAAC CtesDRAFT_1104
-166 5.1 GTTTACGTAAACGTCAAA
Delftia acidovorans SPH-1
Position: -50
Score: 5.15029
Sequence: ATTTCGGTTTACGTAAAC
Position: -44
Score: 5.34588
Sequence: GTTTACGTAAACGTCAAT
Locus tag: Daci_2390
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Daci_2391
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Daci_2392
Name: livK
Funciton: Branched-chain amino acid ABC transport system, periplasmic binding component
Locus tag: Daci_2393
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
etfB-etfA-livK-acdH -50 5.2 ATTTCGGTTTACGTAAAC Daci_2390
-44 5.3 GTTTACGTAAACGTCAAT
Polaromonas naphthalenivorans CJ2
Position: -50
Score: 5.62617
Sequence: GCTTACGTTTACGTCAAC
Position: -44
Score: 5.09697
Sequence: GTTTACGTCAACGTCAAT
Locus tag: Pnap_1223
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Pnap_1224
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Pnap_1225
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
etfB-etfA-acdH -50 5.6 GCTTACGTTTACGTCAAC Pnap_1223
-44 5.1 GTTTACGTCAACGTCAAT
Polaromonas sp. JS666
Position: -46
Score: 5.62617
Sequence: GCTTACGTTTACGTCAAC
Position: -40
Score: 5.09697
Sequence: GTTTACGTCAACGTCAAT
Locus tag: Bpro_3143
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Bpro_3142
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Bpro_3141
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
etfB-etfA-acdH -46 5.6 GCTTACGTTTACGTCAAC Bpro_3143
-40 5.1 GTTTACGTCAACGTCAAT
Rhodoferax ferrireducens DSM 15236
Position: -77
Score: 5.46063
Sequence: GTTGACGTGCACGTCAAC
Locus tag: Rfer_1957
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Rfer_1958
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Rfer_1959
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
etfB-etfA-acdH -77 5.5 GTTGACGTGCACGTCAAC Rfer_1957