Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing agaF-II gene

Properties
Regulog: AgaR - Vibrionales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria/Gamma
Built upon 11 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -250
Score: 7.29414
Sequence: GAAAGG-(16)-TGAAAG
Position: -39
Score: 6.63995
Sequence: GAAAGA-(14)-CGTAAG
Locus tag: PBPRB0140
Name: agaR2
Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Locus tag: PBPRB0141
Name: agaZ
Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: PBPRB0142
Name: agaS
Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: PBPRB0143
Name: agaV-II
Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
Locus tag: PBPRB0144
Name: agaW-II
Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
Locus tag: PBPRB0145
Name: agaE-II
Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
Locus tag: PBPRB0146
Name: agaF-II
Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
Locus tag: PBPRB0147
Name: agaA
Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
agaR2-agaZ-agaS-agaV-II-agaW-II-agaE-II-agaF-II-agaA -250 7.3 GAAAGG-(16)-TGAAAG PBPRB0140
-39 6.6 GAAAGA-(14)-CGTAAG
Vibrio fischeri ES114
Position: -60
Score: 6.41312
Sequence: GTAAGG-(16)-CGAAAG
Locus tag: VF_A1006
Name: agaR2
Funciton: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Locus tag: VF_A1005
Name: agaZ
Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: VF_A1004
Name: agaS
Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: VF_A1003
Name: agaV-II
Funciton: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
Locus tag: VF_A1002
Name: agaW-II
Funciton: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
Locus tag: VF_A1001
Name: agaE-II
Funciton: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
Locus tag: VF_A1000
Name: agaF-II
Funciton: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
Locus tag: VF_A0999
Name: agaA
Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
agaR2-agaZ-agaS-agaV-II-agaW-II-agaE-II-agaF-II-agaA -60 6.4 GTAAGG-(16)-CGAAAG VF_A1006