Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rbsA gene

Properties
Regulog: RbsR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Proteobacteria/beta
Built upon 2 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -124
Score: 6.80178
Sequence: AAGCGCAAACGTTTGCGCAA
Locus tag: Aave_4196
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Aave_4197
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Aave_4198
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Aave_4199
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
Locus tag: Aave_4200
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Aave_4201
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
rbsB-rbsA-rbsC-rbsR-rbsK-rbsD -124 6.8 AAGCGCAAACGTTTGCGCAA Aave_4196
Variovorax paradoxus S110
Position: -95
Score: 6.62679
Sequence: ATTAGCAAACGTTTGCGCAA
Locus tag: Vapar_4636
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Vapar_4637
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Vapar_4638
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Vapar_4639
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
Locus tag: Vapar_4640
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Vapar_4641
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
rbsB-rbsA-rbsC-rbsR-rbsK-rbsD -95 6.6 ATTAGCAAACGTTTGCGCAA Vapar_4636