Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rbsA gene

Properties
Regulog: RbsR - Psychromonadaceae/Aeromonadales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Proteobacteria/gamma
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Position: -72
Score: 5.42914
Sequence: TGACGCAACCGGTTGCGTAA
Locus tag: AHA_2309
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: AHA_2310
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: AHA_2311
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: AHA_2312
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: AHA_2313
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: AHA_2314
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -72 5.4 TGACGCAACCGGTTGCGTAA AHA_2309
Moritella sp. PE36
Position: -94
Score: 5.60385
Sequence: CCATCGAAACGTTTGCGCAA
Position: -82
Score: 5.60385
Sequence: TTGCGCAAACGTTTCGATGG
Locus tag: PE36_05828
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: PE36_05823
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: PE36_05818
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: PE36_05813
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: PE36_05808
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: PE36_05803
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -94 5.6 CCATCGAAACGTTTGCGCAA PE36_05828
-82 5.6 TTGCGCAAACGTTTCGATGG
Psychromonas ingrahamii 37
Position: -107
Score: 5.60385
Sequence: CCATCGAAACGTTTGCGCAA
Locus tag: Ping_0340
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Ping_0341
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Ping_0342
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Ping_0343
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Ping_0344
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Ping_0345
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -107 5.6 CCATCGAAACGTTTGCGCAA Ping_0340
Psychromonas sp. CNPT3
Position: -94
Score: 5.72743
Sequence: TTATCGAAACGTTTGCGCAA
Position: -82
Score: 5.60385
Sequence: TTGCGCAAACGTTTCGATGG
Locus tag: PCNPT3_07068
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: PCNPT3_07073
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: PCNPT3_07078
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: PCNPT3_07083
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: PCNPT3_07088
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: PCNPT3_07093
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -94 5.7 TTATCGAAACGTTTGCGCAA PCNPT3_07068
-82 5.6 TTGCGCAAACGTTTCGATGG
Tolumonas auensis DSM 9187
Position: -139
Score: 5.48485
Sequence: CCATCGAAACGTTTCGATGG
Locus tag: Tola_0571
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Tola_0572
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Tola_0573
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Tola_0574
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Tola_0575
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Tola_0576
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -139 5.5 CCATCGAAACGTTTCGATGG Tola_0571