Orthologous regulated operons containing kdgM gene

Properties
Regulog:	KdgR - Vibrionales
Regulator type:	Transcription factor
Regulator family:	IclR
Regulation mode:	repressor (activator)
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Phylum:	Proteobacteria/gamma

Built upon 40 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -122 Score: 5.56897 Sequence: AATTAAAACGCCGTTTCAATG Position: -32 Score: 5.8477 Sequence: AATTAAAACGGCGTTTTAAAA Locus tag: PBPRB1726 Name: kdgM Funciton: Oligogalacturonate-specific porin protein KdgM Locus tag: PBPRB1725 Name: pelX Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
kdgM-pelX	-122	5.6	AATTAAAACGCCGTTTCAATG	PBPRB1726
	-32	5.8	AATTAAAACGGCGTTTTAAAA
Vibrio parahaemolyticus RIMD 2210633
Position: -110 Score: 5.44752 Sequence: AATTAAAACACCGTTTTAAAG Position: -20 Score: 5.53499 Sequence: AAATAAAATGGTGTTTCAAAA Locus tag: VPA0085 Name: kdgM Funciton: Oligogalacturonate-specific porin protein KdgM Locus tag: VPA0086 Name: pelX Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
kdgM-pelX	-110	5.4	AATTAAAACACCGTTTTAAAG	VPA0085
	-20	5.5	AAATAAAATGGTGTTTCAAAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --