Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing uxuB gene

Properties
Regulog: UxuR - Vibrionales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Built upon 28 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -201
Score: 5.05461
Sequence: CAATTGGTTGACCTATAT
Position: -167
Score: 5.58338
Sequence: ATATTGGTCAACCAATTC
Position: -54
Score: 5.21432
Sequence: ACATTGGTTAACCAAACG
Locus tag: PBPRB1878
Name: uxuQ
Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: PBPRB1879
Name: uxuM
Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: PBPRB1880
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
uxuQ-uxuM-uxuB -201 5.1 CAATTGGTTGACCTATAT PBPRB1878
-167 5.6 ATATTGGTCAACCAATTC
-54 5.2 ACATTGGTTAACCAAACG
Vibrio parahaemolyticus RIMD 2210633
Position: -197
Score: 5.28074
Sequence: AAATTGATTGACCAAAAT
Position: -163
Score: 6.02139
Sequence: AAATTGGTTAACCAATTC
Position: -48
Score: 5.63879
Sequence: ACATTGGTAAACCAATTG
Locus tag: VPA1703
Name: uxuQ
Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VPA1704
Name: uxuM
Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VPA1705
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VPA1706
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VPA1707
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VPA1708
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VPA1709
Name: ygjV
Funciton: Conserved hypothetical protein
uxuQ-uxuM-uxuB-uxaC-kdgK-eda-ygjV -197 5.3 AAATTGATTGACCAAAAT VPA1703
-163 6 AAATTGGTTAACCAATTC
-48 5.6 ACATTGGTAAACCAATTG
Vibrio shilonii AK1
Position: -168
Score: 5.26327
Sequence: GAATTGGTTGACCAATGT
Locus tag: VSAK1_20679
Name: uxuQ
Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VSAK1_20674
Name: uxuM
Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VSAK1_20669
Name: null
Funciton: hypothetical protein
Locus tag: VSAK1_20664
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VSAK1_20659
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VSAK1_20654
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VSAK1_20649
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VSAK1_20644
Name: null
Funciton: hypothetical protein
Locus tag: VSAK1_20639
Name: ygjV
Funciton: Conserved hypothetical protein
uxuQ-uxuM-VSAK1_20669-uxuB-uxaC-kdgK-eda-VSAK1_20644-ygjV -168 5.3 GAATTGGTTGACCAATGT VSAK1_20679
Vibrio vulnificus CMCP6
Position: -203
Score: 5.28074
Sequence: AAATTGATTGACCAAAAT
Position: -169
Score: 5.91725
Sequence: AAATTGGTTAACCAATCT
Position: -54
Score: 5.63879
Sequence: ACATTGGTAAACCAATTG
Locus tag: VV21067
Name: uxuQ
Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VV21068
Name: uxuM
Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VV21069
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VV21070
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VV21071
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VV21072
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VV21073
Name: ygjV
Funciton: Conserved hypothetical protein
uxuQ-uxuM-uxuB-uxaC-kdgK-eda-ygjV -203 5.3 AAATTGATTGACCAAAAT VV21067
-169 5.9 AAATTGGTTAACCAATCT
-54 5.6 ACATTGGTAAACCAATTG