Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ntrB gene

Properties
Regulog: NtrC - Vibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/gamma
Built upon 29 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -66
Score: 5.87566
Sequence: TGCACCAATATGGTGCG
Locus tag: PBPRA3494
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: PBPRA3495
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -66 5.9 TGCACCAATATGGTGCG PBPRA3494
Vibrio angustum S14
Position: -70
Score: 5.83582
Sequence: TGCACCAATTTGGTGCG
Locus tag: VAS14_22979
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VAS14_22974
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -70 5.8 TGCACCAATTTGGTGCG VAS14_22979
Vibrio cholerae O1 biovar eltor str. N16961
Position: -50
Score: 5.51338
Sequence: TGCACCAATTTTGTGCA
Locus tag: VC2748
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VC2749
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -50 5.5 TGCACCAATTTTGTGCA VC2748
Vibrio fischeri ES114
Position: -37
Score: 5.78465
Sequence: TGCACCATGATGGTGCA
Locus tag: VF_0096
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VF_0095
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -37 5.8 TGCACCATGATGGTGCA VF_0096
Vibrio harveyi ATCC BAA-1116
Position: -85
Score: 5.80891
Sequence: TGCACCAATATAGTGCA
Locus tag: VIBHAR_00585
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VIBHAR_00584
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -85 5.8 TGCACCAATATAGTGCA VIBHAR_00585
Vibrio parahaemolyticus RIMD 2210633
Position: -49
Score: 5.59306
Sequence: TGCACCATTATTGTGCA
Locus tag: VP0119
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VP0118
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -49 5.6 TGCACCATTATTGTGCA VP0119
Vibrio shilonii AK1
Position: -123
Score: 5.80891
Sequence: TGCACCATTTTAGTGCA
Locus tag: VSAK1_12507
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VSAK1_12502
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -123 5.8 TGCACCATTTTAGTGCA VSAK1_12507
Vibrio splendidus LGP32
Position: -48
Score: 5.83582
Sequence: CGCACCAATTTGGTGCA
Locus tag: VS_0119
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VS_0118
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -48 5.8 CGCACCAATTTGGTGCA VS_0119
Vibrio vulnificus CMCP6
Position: -46
Score: 5.54683
Sequence: TGCACCAACTTAGTGCA
Locus tag: VV1_0891
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: VV1_0892
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrB-ntrC -46 5.5 TGCACCAACTTAGTGCA VV1_0891