Orthologous regulated operons containing prpB gene

Properties
Regulog:	PrpR - Pseudomonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Methylcitrate utilization
Effector:	2-methylcitrate
Phylum:	Proteobacteria/gamma

Built upon 17 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -85 Score: 5.82454 Sequence: ATTGTCGACAAT Position: -12 Score: 5.82454 Sequence: ATTGTCGACAAT Locus tag: Avin_23200 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: Avin_23210 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: Avin_23220 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: Avin_23230 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: Avin_23250 Name: prpF Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF	-85	5.8	ATTGTCGACAAT	Avin_23200
	-12	5.8	ATTGTCGACAAT
Pseudomonas aeruginosa PAO1
Position: -96 Score: 5.82454 Sequence: ATTGTCGACAAT Position: -33 Score: 4.68522 Sequence: ATTGTCGACACA Locus tag: PA0797 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: PA0796 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: PA0795 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: PA0794 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: PA0793 Name: prpF Funciton: Aconitase accessory protein PrpF Locus tag: PA0792 Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD	-96	5.8	ATTGTCGACAAT	PA0797
	-33	4.7	ATTGTCGACACA
Pseudomonas entomophila L48
Position: -86 Score: 5.82454 Sequence: ATTGTCGACAAT Position: -13 Score: 4.81894 Sequence: GGTGTCGACAAT Locus tag: PSEEN1901 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: PSEEN1902 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: PSEEN1903 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: PSEEN1905 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: PSEEN1906 Name: prpF Funciton: Aconitase accessory protein PrpF Locus tag: PSEEN1907 Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD	-86	5.8	ATTGTCGACAAT	PSEEN1901
	-13	4.8	GGTGTCGACAAT
Pseudomonas fluorescens Pf-5
Position: -85 Score: 5.82454 Sequence: ATTGTCGACAAT Position: -12 Score: 4.81894 Sequence: GGTGTCGACAAT Locus tag: PFL_1860 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: PFL_1861 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: PFL_1862 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
prpR-prpB-prpC	-85	5.8	ATTGTCGACAAT	PFL_1860
	-12	4.8	GGTGTCGACAAT
Pseudomonas mendocina ymp
Position: -87 Score: 5.82454 Sequence: ATTGTCGACAAT Position: -13 Score: 4.81894 Sequence: GGTGTCGACAAT Locus tag: Pmen_2079 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: Pmen_2080 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: Pmen_2081 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: Pmen_2082 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: Pmen_2083 Name: prpF Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF	-87	5.8	ATTGTCGACAAT	Pmen_2079
	-13	4.8	GGTGTCGACAAT
Pseudomonas putida KT2440
Position: -85 Score: 5.82454 Sequence: ATTGTCGACAAT Position: -12 Score: 4.81894 Sequence: GGTGTCGACAAT Locus tag: PP2333 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: PP2334 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: PP2335 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: PP2336 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: PP2337 Name: prpF Funciton: Aconitase accessory protein PrpF Locus tag: PP2338 Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
prpR-prpB-prpC-acnD-prpF-prpD	-85	5.8	ATTGTCGACAAT	PP2333
	-12	4.8	GGTGTCGACAAT
Pseudomonas stutzeri A1501
Position: -88 Score: 4.81894 Sequence: GGTGTCGACAAT Position: -13 Score: 5.82454 Sequence: ATTGTCGACAAT Locus tag: PST_2033 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: PST_2034 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: PST_2035 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: PST_2036 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: PST_2037 Name: prpF Funciton: Aconitase accessory protein PrpF
prpR-prpB-prpC-acnD-prpF	-88	4.8	GGTGTCGACAAT	PST_2033
	-13	5.8	ATTGTCGACAAT
Pseudomonas syringae pv. tomato str. DC3000
Position: -104 Score: 5.29278 Sequence: ATTGTCGACAGT Position: -31 Score: 4.81894 Sequence: GGTGTCGACAAT Locus tag: PSPTO2286 Name: prpR Funciton: Propionate catabolism transcriptional regulator, GntR family Locus tag: PSPTO2287 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
prpR-prpB	-104	5.3	ATTGTCGACAGT	PSPTO2286
	-31	4.8	GGTGTCGACAAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing prpB gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --