Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing yciC gene

Properties
Regulog: Zur - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/gamma
Built upon 62 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -119
Score: 5.22936
Sequence: AAAATGTTATGTTATAACTATAA
Locus tag: Avin_22970
Name: dksA2
Funciton: C4-type zinc finger protein, DksA/TraR family
Locus tag: Avin_22980
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: Avin_22990
Name: PF08856
Funciton: hypothetical protein
dksA2-yciC-PF08856 -119 5.2 AAAATGTTATGTTATAACTATAA Avin_22970
Pseudomonas aeruginosa PAO1
Position: -43
Score: 5.54042
Sequence: TAATTGTTATAGTATAACGTTTT
Locus tag: PA5536
Name: dksA2
Funciton: C4-type zinc finger protein, DksA/TraR family
Locus tag: PA5535
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: PA5534
Name: PF08856
Funciton: hypothetical protein
dksA2-yciC-PF08856 -43 5.5 TAATTGTTATAGTATAACGTTTT PA5536
Pseudomonas entomophila L48
Position: -70
Score: 4.57183
Sequence: AAATTGTATTGTTATAATATAAC
Position: -65
Score: 5.85945
Sequence: GTATTGTTATAATATAACATTGC
Locus tag: PSEEN5513
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: PSEEN5512
Name: PF08856
Funciton: hypothetical protein
Locus tag: PSEEN5511
Name: yciC2
Funciton: Putative metal chaperone, GTPase of COG0523 family
yciC-PF08856-yciC2 -70 4.6 AAATTGTATTGTTATAATATAAC PSEEN5513
-65 5.9 GTATTGTTATAATATAACATTGC
Pseudomonas fluorescens Pf-5
Position: -48
Score: 5.93557
Sequence: GTGTTGTTATAATATAACATAAA
Locus tag: PFL_6174
Name: dksA2
Funciton: C4-type zinc finger protein, DksA/TraR family
Locus tag: PFL_6173
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: PFL_6172
Name: PF08856
Funciton: hypothetical protein
Locus tag: PFL_6171
Name: yciC2
Funciton: Putative metal chaperone, GTPase of COG0523 family
dksA2-yciC-PF08856-yciC2 -48 5.9 GTGTTGTTATAATATAACATAAA PFL_6174
Pseudomonas mendocina ymp
Position: -44
Score: 5.06285
Sequence: TAAATGTTATGTTATAACAATTG
Locus tag: Pmen_4537
Name: dksA2
Funciton: C4-type zinc finger protein, DksA/TraR family
Locus tag: Pmen_4536
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: Pmen_4535
Name: PF08856
Funciton: hypothetical protein
dksA2-yciC-PF08856 -44 5.1 TAAATGTTATGTTATAACAATTG Pmen_4537
Pseudomonas putida KT2440
Position: -65
Score: 5.09009
Sequence: GTATTGTTACCTTATAACATTAT
Locus tag: PP5361
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: PP5360
Name: PF08856
Funciton: hypothetical protein
Locus tag: PP5359
Name: yciC2
Funciton: Putative metal chaperone, GTPase of COG0523 family
yciC-PF08856-yciC2 -65 5.1 GTATTGTTACCTTATAACATTAT PP5361
Pseudomonas stutzeri A1501
Position: -90
Score: 4.69604
Sequence: TAAACGTTATGTTATAACTAATC
Locus tag: PST_3603
Name: dksA2
Funciton: C4-type zinc finger protein, DksA/TraR family
Locus tag: PST_3604
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: PST_3605
Name: PF08856
Funciton: hypothetical protein
dksA2-yciC-PF08856 -90 4.7 TAAACGTTATGTTATAACTAATC PST_3603
Pseudomonas syringae pv. tomato str. DC3000
Position: -108
Score: 5.39966
Sequence: GTGTTGTTATACTATAACATCAT
Locus tag: PSPTO5526
Name: yciC
Funciton: Putative metal chaperone, GTPase of COG0523 family
Locus tag: PSPTO5525
Name: PF08856
Funciton: hypothetical protein
yciC-PF08856 -108 5.4 GTGTTGTTATACTATAACATCAT PSPTO5526