Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdD gene

Properties
Regulog: NrdR - Vibrionales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Built upon 40 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -82
Score: 4.73823
Sequence: ACACCACATGTTGTAT
Position: -51
Score: 4.77653
Sequence: AGCCTATATTTTGTGT
Locus tag: PBPRB0442
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PBPRB0443
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -82 4.7 ACACCACATGTTGTAT PBPRB0442
-51 4.8 AGCCTATATTTTGTGT
Vibrio angustum S14
Position: -91
Score: 3.64419
Sequence: TACCCACATCTTGTTG
Position: -59
Score: 4.72102
Sequence: TGCCTATATTTTGTGT
Locus tag: VAS14_13509
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VAS14_13504
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -91 3.6 TACCCACATCTTGTTG VAS14_13509
-59 4.7 TGCCTATATTTTGTGT
Vibrio cholerae O1 biovar eltor str. N16961
Position: -89
Score: 5.36971
Sequence: CCACAACATATAGTGT
Position: -58
Score: 4.38626
Sequence: TAGCCCTATATAGTGT
Locus tag: VCA0511
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VCA0512
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -89 5.4 CCACAACATATAGTGT VCA0511
-58 4.4 TAGCCCTATATAGTGT
Vibrio fischeri ES114
Position: -58
Score: 4.96518
Sequence: ACCCCACATCTTGTGT
Position: -27
Score: 4.85628
Sequence: CCCCACTATTTAGTAT
Locus tag: VF_A0281
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VF_A0282
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -58 5 ACCCCACATCTTGTGT VF_A0281
-27 4.9 CCCCACTATTTAGTAT
Vibrio harveyi ATCC BAA-1116
Position: -90
Score: 5.63045
Sequence: CCACAATATATTGTGT
Position: -59
Score: 4.56311
Sequence: TAACCCCATATAGTGT
Locus tag: VIBHAR_05713
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VIBHAR_05714
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -90 5.6 CCACAATATATTGTGT VIBHAR_05713
-59 4.6 TAACCCCATATAGTGT
Vibrio parahaemolyticus RIMD 2210633
Position: -91
Score: 5.63045
Sequence: CCACAATATATTGTGT
Position: -60
Score: 4.56311
Sequence: TAACCCCATATAGTGT
Locus tag: VPA0941
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VPA0940
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -91 5.6 CCACAATATATTGTGT VPA0941
-60 4.6 TAACCCCATATAGTGT
Vibrio salmonicida LFI1238
Position: -58
Score: 4.96518
Sequence: ACACCACATCTTGTGT
Position: -27
Score: 4.67155
Sequence: ACCCACTATTTAGTAT
Locus tag: VSAL_II0791
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VSAL_II0790
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -58 5 ACACCACATCTTGTGT VSAL_II0791
-27 4.7 ACCCACTATTTAGTAT
Vibrio shilonii AK1
Position: -91
Score: 5.63045
Sequence: CCACAATATATTGTGT
Position: -60
Score: 5.04287
Sequence: CAACCCTATATAGTGT
Locus tag: VSAK1_14882
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VSAK1_14877
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -91 5.6 CCACAATATATTGTGT VSAK1_14882
-60 5 CAACCCTATATAGTGT
Vibrio splendidus LGP32
Position: -86
Score: 5.48871
Sequence: CCACAATATCTAGTGT
Position: -55
Score: 4.28898
Sequence: TCGCTCTATAGTGTGT
Locus tag: VS_II0710
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VS_II0712
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -86 5.5 CCACAATATCTAGTGT VS_II0710
-55 4.3 TCGCTCTATAGTGTGT
Vibrio vulnificus CMCP6
Position: -92
Score: 5.17208
Sequence: CCACAATATATAGTGC
Position: -61
Score: 4.80263
Sequence: TAACCCTATATAGTGT
Locus tag: VV20337
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: VV20336
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -92 5.2 CCACAATATATAGTGC VV20337
-61 4.8 TAACCCTATATAGTGT
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