Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing trpD_b gene

Properties
Regulog: TrpR - Vibrionales
Regulator type: Transcription factor
Regulator family: TrpR
Regulation mode: repressor
Biological process: Tryptophan biosynthesis
Effector: Tryptophan
Phylum: Proteobacteria/gamma
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -274
Score: 6.28786
Sequence: CGAACTAGTTTACTAGTACG
Locus tag: PBPRA2485
Name: aroF2
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
Locus tag: PBPRA2486
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: PBPRA2487
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: PBPRA2488
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: PBPRA2489
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: PBPRA2490
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: PBPRA2491
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
aroF2-trpE-trpD_a-trpD_b-trpC-trpB-trpA -274 6.3 CGAACTAGTTTACTAGTACG PBPRA2485
Vibrio angustum S14
Position: -322
Score: 6.342
Sequence: TGAACTAGTTTACTAGTACG
Locus tag: VAS14_18374
Name: aroF2
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
Locus tag: VAS14_18369
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VAS14_18364
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VAS14_18359
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VAS14_18354
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VAS14_18349
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VAS14_18344
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
aroF2-trpE-trpD_a-trpD_b-trpC-trpB-trpA -322 6.3 TGAACTAGTTTACTAGTACG VAS14_18374
Vibrio cholerae O1 biovar eltor str. N16961
Position: -294
Score: 6.46042
Sequence: CGCACTAGTTAACTAGTACG
Locus tag: VC1174
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VC1173
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VC1172
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VC1171
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VC1170
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VC1169
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -294 6.5 CGCACTAGTTAACTAGTACG VC1174
Vibrio fischeri ES114
Position: -347
Score: 6.30686
Sequence: CGCACTAGTTTACTAGTACA
Locus tag: VF_2602
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VF_1033
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VF_1032
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VF_1031
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VF_1029
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VF_1028
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VF_1027
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpE-trpD_a-trpD_b-trpC-trpB-trpA -347 6.3 CGCACTAGTTTACTAGTACA VF_2602
Vibrio harveyi ATCC BAA-1116
Position: -351
Score: 6.56868
Sequence: TGCACTAGTTAACTAGTACA
Locus tag: VIBHAR_02758
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VIBHAR_02759
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VIBHAR_02760
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VIBHAR_02761
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VIBHAR_02762
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VIBHAR_02763
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -351 6.6 TGCACTAGTTAACTAGTACA VIBHAR_02758
Vibrio parahaemolyticus RIMD 2210633
Position: -352
Score: 6.46042
Sequence: CGCACTAGTTAACTAGTACG
Locus tag: VP1956
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VP1957
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VP1958
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VP1959
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VP1960
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VP1961
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -352 6.5 CGCACTAGTTAACTAGTACG VP1956
Vibrio salmonicida LFI1238
Position: -339
Score: 6.25272
Sequence: CGCACTAGTTTACTAGTACG
Locus tag: VSAL_I1154
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAL_I1153
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAL_I1152
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAL_I1151
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAL_I1150
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAL_I1149
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -339 6.3 CGCACTAGTTTACTAGTACG VSAL_I1154
Vibrio shilonii AK1
Position: -333
Score: 6.49556
Sequence: CGAACTAGTTAACTAGTACG
Locus tag: VSAK1_01022
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAK1_01017
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAK1_01012
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAK1_01007
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAK1_01002
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAK1_00997
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -333 6.5 CGAACTAGTTAACTAGTACG VSAK1_01022
Vibrio splendidus LGP32
Position: -317
Score: 5.80691
Sequence: AAAACTAGTTAACTAGTACA
Locus tag: VS_1966
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VS_1967
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VS_1968
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VS_1969
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VS_1970
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VS_1971
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -317 5.8 AAAACTAGTTAACTAGTACA VS_1966
Vibrio vulnificus CMCP6
Position: -355
Score: 6.56868
Sequence: TGCACTAGTTAACTAGTACA
Locus tag: VV1_3064
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VV1_3065
Name: trpD_a
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VV1_3066
Name: trpD_b
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VV1_3067
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VV1_3068
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VV1_3069
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpD_a-trpD_b-trpC-trpB-trpA -355 6.6 TGCACTAGTTAACTAGTACA VV1_3064
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