Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing uxaA gene

Properties
Regulog: RmgR - Bacillales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Firmicutes
Built upon 10 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus clausii KSM-K16
Position: -174
Score: 5.27723
Sequence: TCATTT-(13)-gCAaaT
Locus tag: ABC1144
Name: ytcQ
Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component
Locus tag: ABC1145
Name: yteP
Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
Locus tag: ABC1146
Name: ytcP
Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
Locus tag: ABC1147
Name: null
Funciton: Putative hydrolase
Locus tag: ABC1148
Name: xylB
Funciton: Beta-xylosidase (EC 3.2.1.37)
Locus tag: ABC1149
Name: rhiN2
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: ABC1150
Name: yteS
Funciton: putative lipoprotein required for rhamnogalaturonan degradation
Locus tag: ABC1151
Name: null
Funciton: Hypothetical protein
Locus tag: ABC1152
Name: yteT
Funciton: Putative dehydrogenase of rhamnogalaturonan degradation
Locus tag: ABC1153
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
Locus tag: ABC1154
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
ytcQ-yteP-ytcP-ABC1147-xylB-rhiN2-yteS-ABC1151-yteT-uxaA-uxaB -174 5.3 TCATTT-(13)-gCAaaT ABC1144
Bacillus halodurans C-125
Position: -155
Score: 7.68228
Sequence: TCATTA-(13)-TCATTT
Locus tag: BH0484
Name: yteP
Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
Locus tag: BH0485
Name: rhiN2
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BH0486
Name: yteS
Funciton: putative lipoprotein required for rhamnogalaturonan degradation
Locus tag: BH0487
Name: yteT
Funciton: Putative dehydrogenase of rhamnogalaturonan degradation
Locus tag: BH0488
Name: yteU
Funciton: Putative membrane enzyme for rhamnogalaturonan degradation
Locus tag: BH0489
Name: BH0489
Funciton: Sodium dependent transporter
Locus tag: BH0490
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
Locus tag: BH0491
Name: BH0491
Funciton: Putative peptidase
Locus tag: BH0492
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Locus tag: BH0493
Name: BH0493
Funciton: Uronate isomerase, family BH0493 (EC 5.3.1.12)
Locus tag: BH0494
Name: pelX
Funciton: Exopolygalacturonate lyase
yteP-rhiN2-yteS-yteT-yteU-BH0489-uxaA-BH0491-uxaB-BH0493-pelX -155 7.7 TCATTA-(13)-TCATTT BH0484