Orthologous regulated operons containing rhiN2 gene

Properties
Regulog:	RmgR - Bacillales
Regulator type:	Transcription factor
Regulator family:	AraC
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Phylum:	Firmicutes

Built upon 10 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus clausii KSM-K16
Position: -174 Score: 5.27723 Sequence: TCATTT-(13)-gCAaaT Locus tag: ABC1144 Name: ytcQ Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, substrate-binding component Locus tag: ABC1145 Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 Locus tag: ABC1146 Name: ytcP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2 Locus tag: ABC1147 Name: null Funciton: Putative hydrolase Locus tag: ABC1148 Name: xylB Funciton: Beta-xylosidase (EC 3.2.1.37) Locus tag: ABC1149 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: ABC1150 Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation Locus tag: ABC1151 Name: null Funciton: Hypothetical protein Locus tag: ABC1152 Name: yteT Funciton: Putative dehydrogenase of rhamnogalaturonan degradation Locus tag: ABC1153 Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) Locus tag: ABC1154 Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58)
ytcQ-yteP-ytcP-ABC1147-xylB-rhiN2-yteS-ABC1151-yteT-uxaA-uxaB	-174	5.3	TCATTT-(13)-gCAaaT	ABC1144
Bacillus halodurans C-125
Position: -155 Score: 7.68228 Sequence: TCATTA-(13)-TCATTT Locus tag: BH0484 Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 Locus tag: BH0485 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BH0486 Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation Locus tag: BH0487 Name: yteT Funciton: Putative dehydrogenase of rhamnogalaturonan degradation Locus tag: BH0488 Name: yteU Funciton: Putative membrane enzyme for rhamnogalaturonan degradation Locus tag: BH0489 Name: BH0489 Funciton: Sodium dependent transporter Locus tag: BH0490 Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) Locus tag: BH0491 Name: BH0491 Funciton: Putative peptidase Locus tag: BH0492 Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58) Locus tag: BH0493 Name: BH0493 Funciton: Uronate isomerase, family BH0493 (EC 5.3.1.12) Locus tag: BH0494 Name: pelX Funciton: Exopolygalacturonate lyase
yteP-rhiN2-yteS-yteT-yteU-BH0489-uxaA-BH0491-uxaB-BH0493-pelX	-155	7.7	TCATTA-(13)-TCATTT	BH0484
Bacillus licheniformis DSM 13
Position: -139 Score: 8.18621 Sequence: TCATTT-(13)-TCATTT Locus tag: BLi03166 Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 Locus tag: BLi03165 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BLi03164 Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation Locus tag: BLi03163 Name: yteT Funciton: Putative dehydrogenase of rhamnogalaturonan degradation Locus tag: BLi03162 Name: yteU Funciton: Putative membrane enzyme for rhamnogalaturonan degradation
yteP-rhiN2-yteS-yteT-yteU	-139	8.2	TCATTT-(13)-TCATTT	BLi03166
Bacillus pumilus SAFR-032
Position: -223 Score: 6.71262 Sequence: CCATTT-(12)-TCTTTT Position: -155 Score: 8.18621 Sequence: TCATTT-(13)-TCATTT Locus tag: BPUM_2660 Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 Locus tag: BPUM_2659 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BPUM_2658 Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation Locus tag: BPUM_2657 Name: yteT Funciton: Putative dehydrogenase of rhamnogalaturonan degradation Locus tag: BPUM_2656 Name: yteU Funciton: Putative membrane enzyme for rhamnogalaturonan degradation
yteP-rhiN2-yteS-yteT-yteU	-223	6.7	CCATTT-(12)-TCTTTT	BPUM_2660
	-155	8.2	TCATTT-(13)-TCATTT
Bacillus subtilis subsp. subtilis str. 168
Position: -154 Score: 7.68228 Sequence: TCATTT-(13)-TCTTTT Locus tag: BSU30135 Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 Locus tag: BSU30120 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BSU30110 Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation Locus tag: BSU30100 Name: yteT Funciton: Putative dehydrogenase of rhamnogalaturonan degradation Locus tag: BSU30090 Name: yteU Funciton: Putative membrane enzyme for rhamnogalaturonan degradation
yteP-rhiN2-yteS-yteT-yteU	-154	7.7	TCATTT-(13)-TCTTTT	BSU30135
Oceanobacillus iheyensis HTE831
Position: -169 Score: 6.71262 Sequence: TCAATT-(12)-TCATTA Locus tag: OB2090 Name: yteP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 Locus tag: OB2089 Name: ytcP Funciton: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2 Locus tag: OB2088 Name: pglR Funciton: Polygalacturonase Locus tag: OB2087 Name: xylB Funciton: Beta-xylosidase (EC 3.2.1.37) Locus tag: OB2086 Name: rhiN2 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: OB2085 Name: yteS Funciton: putative lipoprotein required for rhamnogalaturonan degradation Locus tag: OB2084 Name: rhgT Funciton: Rhamnogalacturonan acetylesterase
yteP-ytcP-pglR-xylB-rhiN2-yteS-rhgT	-169	6.7	TCAATT-(12)-TCATTA	OB2090