Orthologous regulated operons containing rbsK gene
| Regulog: | CcpA - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactobacillus acidophilus NCFM | ||||
|
Position: -101
Score: 4.68212 Sequence: TTGAAAGCGATTACAC
Locus tag: LBA1485
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LBA1484
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: LBA1483
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: LBA1482
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: LBA1481
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
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| rbsK-rbsD-rbsA-rbsC-rbsB | -101 | 4.7 | TTGAAAGCGATTACAC | LBA1485 |
| Lactobacillus fermentum IFO 3956 | ||||
|
Position: -158
Score: 4.28067 Sequence: TAGCAAACGCTTGCAT
Position: -103
Score: 4.45468 Sequence: TTGCAACCGCTTTCCT
Locus tag: LAF_1738
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LAF_1737
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
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| rbsK-rbsD | -158 | 4.3 | TAGCAAACGCTTGCAT | LAF_1738 |
| -103 | 4.5 | TTGCAACCGCTTTCCT | ||
| Lactobacillus plantarum WCFS1 | ||||
|
Position: -72
Score: 4.89164 Sequence: ATTAAAACGTTTTCAT
Locus tag: lp_3660
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: lp_3659
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: lp_3658
Name: rbsU Funciton: Ribose uptake protein RbsU (TC 2.A.7.5) |
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| rbsK-rbsD-rbsU | -72 | 4.9 | ATTAAAACGTTTTCAT | lp_3660 |
| Lactobacillus reuteri JCM 1112 | ||||
|
Position: -135
Score: 4.37711 Sequence: TGAAAAGCGATTTCAA
Position: -76
Score: 4.50079 Sequence: TTGTAATCACTTTCAA
Locus tag: LAR_0399
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LAR_0400
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
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| rbsK-rbsD | -135 | 4.4 | TGAAAAGCGATTTCAA | LAR_0399 |
| -76 | 4.5 | TTGTAATCACTTTCAA | ||
| Lactobacillus sakei subsp. sakei 23K | ||||
|
Position: -114
Score: 4.32253 Sequence: TGTAAACCGTTTTCAA
Locus tag: LSA0200
Name: rbsU Funciton: Ribose uptake protein RbsU (TC 2.A.7.5)
Locus tag: LSA0201
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: LSA0202
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LSA0203
Name: rbsR Funciton: Ribose operon transcriptional regulator, LacI family |
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| rbsU-rbsD-rbsK-rbsR | -114 | 4.3 | TGTAAACCGTTTTCAA | LSA0200 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
|
Position: -76
Score: 5.14072 Sequence: ATGGAAGCGTTTTCAA
Locus tag: LEUM_0795
Name: rbsR Funciton: Ribose operon transcriptional regulator, LacI family
Locus tag: LEUM_0794
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LEUM_0793
Name: rpiA Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
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| rbsR-rbsK-rpiA | -76 | 5.1 | ATGGAAGCGTTTTCAA | LEUM_0795 |
| Oenococcus oeni PSU-1 | ||||
|
Position: -19
Score: 4.86738 Sequence: TTGAAAACACTTTCAA
Locus tag: OEOE_1612
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: OEOE_1613
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) |
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| rbsK-rbsD | -19 | 4.9 | TTGAAAACACTTTCAA | OEOE_1612 |
| Pediococcus pentosaceus ATCC 25745 | ||||
|
Position: -65
Score: 4.89164 Sequence: ATTAAAACGTTTTCAT
Locus tag: PEPE_1699
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: PEPE_1698
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: PEPE_1697
Name: rbsU Funciton: Ribose uptake protein RbsU (TC 2.A.7.5) |
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| rbsK-rbsD-rbsU | -65 | 4.9 | ATTAAAACGTTTTCAT | PEPE_1699 |