Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylB gene

Properties
Regulog: CcpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Phylum: Firmicutes
Built upon 561 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus brevis ATCC 367
Position: -91
Score: 3.92
Sequence: GCGAAAACGCTTGCAT
Locus tag: LVIS_0183
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: LVIS_0184
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -91 3.9 GCGAAAACGCTTGCAT LVIS_0183
Lactobacillus fermentum IFO 3956
Position: -217
Score: 4.29029
Sequence: TGGGAAGCGGTTTCTA
Locus tag: LAF_0402
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: LAF_0403
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -217 4.3 TGGGAAGCGGTTTCTA LAF_0402
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -83
Score: 4.95287
Sequence: ATGAAAGCGTATACAA
Locus tag: LEUM_0130
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: LEUM_0131
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xylA-xylB -83 5 ATGAAAGCGTATACAA LEUM_0130
Pediococcus pentosaceus ATCC 25745
Position: -150
Score: 4.17263
Sequence: TTGTAAGCGAATACAC
Position: -129
Score: 4.36171
Sequence: ATGTCAACGCTTTTAT
Position: -107
Score: 4.66834
Sequence: TTGAAAACGCTTTACA
Locus tag: PEPE_0185
Name: xynT
Funciton: Na+/xyloside symporter
Locus tag: PEPE_0186
Name: xylR
Funciton: Xylose repressor XylR, ROK family
Locus tag: PEPE_0187
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: PEPE_0188
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
xynT-xylR-xylA-xylB -150 4.2 TTGTAAGCGAATACAC PEPE_0185
-129 4.4 ATGTCAACGCTTTTAT
-107 4.7 TTGAAAACGCTTTACA